RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 CDCA3Q99618 268 aaPredicted RBP12.19□□□□□ -0.46
GGA3-211ENST00000582232 BAG1Q99933 345 aaPredicted RBP12.19□□□□□ -0.46
GGA3-211ENST00000582232 PNPLA8Q9NP80 782 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 FBXW11Q9UKB1 542 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 PCDHGC5Q9Y5F6 944 aa12.19□□□□□ -0.46
GGA3-211ENST00000582232 CLDN5O00501 218 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 TGM5O43548 720 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 CLASP2O75122 1294 aaKnown RBP12.18□□□□□ -0.46
GGA3-211ENST00000582232 AP1G2O75843 785 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 GLUD1P00367 558 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 PLEKP08567 350 aaPredicted RBP12.18□□□□□ -0.46
GGA3-211ENST00000582232 CFHP08603 1231 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 FAM200BP0CF97 657 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 HAPLN1P10915 354 aaPredicted RBP12.18□□□□□ -0.46
GGA3-211ENST00000582232 TNFAIP3P21580 790 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 BDNFP23560 247 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 ADORA2BP29275 332 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 EIF4A3P38919 411 aaKnown RBP12.18□□□□□ -0.46
GGA3-211ENST00000582232 RPL34P49207 117 aaKnown RBP12.18□□□□□ -0.46
GGA3-211ENST00000582232 TUFMP49411 452 aaKnown RBP12.18□□□□□ -0.46
GGA3-211ENST00000582232 ARPP19P56211 112 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 ADCY1Q08828 1119 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 GRIN2CQ14957 1233 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 GOLGA7BQ2TAP0 167 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 ZNF697Q5TEC3 545 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 TAF3Q5VWG9 929 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 PPP1R2P3Q6NXS1 205 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 CLEC20AQ6ZU45 233 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 GPIHBP1Q8IV16 184 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 WDTC1Q8N5D0 677 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 ATAD1Q8NBU5 361 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 TMEM35BQ8NCS4 154 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 SLC22A17Q8WUG5 538 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 SLC35F5Q8WV83 523 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 PPP2R3CQ969Q6 453 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 LRCH3Q96II8 777 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 C8orf48Q96LL4 319 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 PGLYRP2Q96PD5 576 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 PCDHB18PQ96TA0 734 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 SMOQ99835 787 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 MED10Q9BTT4 135 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 PLEKHA4Q9H4M7 779 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 NHEJ1Q9H9Q4 299 aaPredicted RBP12.18□□□□□ -0.46
GGA3-211ENST00000582232 CYLDQ9NQC7 956 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 ABI2Q9NYB9 513 aaPredicted RBP12.18□□□□□ -0.46
GGA3-211ENST00000582232 NENFQ9UMX5 172 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 CEP83Q9Y592 693 aa12.18□□□□□ -0.46
GGA3-211ENST00000582232 GREB1Q4ZG55 1949 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 PRRC2BQ5JSZ5 2229 aaKnown RBP12.17□□□□□ -0.46
GGA3-211ENST00000582232 M0QYV0 167 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 DDX3XO00571 662 aaKnown RBP eCLIP12.17□□□□□ -0.46
GGA3-211ENST00000582232 XPO1O14980 1071 aaKnown RBP12.17□□□□□ -0.46
GGA3-211ENST00000582232 TRIM66O15016 1216 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 PAPLNO95428 1278 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 LCA5LO95447 670 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 SEC24AO95486 1093 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 UNGP13051 313 aaPredicted RBP12.17□□□□□ -0.46
GGA3-211ENST00000582232 CYP2F1P24903 491 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 CA8P35219 290 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 PLA2G4AP47712 749 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 SLC8A3P57103 927 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 NOMO3P69849 1222 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 CENPCQ03188 943 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 PDE4CQ08493 712 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 DUSP4Q13115 394 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 KCNC3Q14003 757 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 SLC18A3Q16572 532 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 DUSP6Q16828 381 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 CLEC16AQ2KHT3 1053 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 DENND1BQ6P3S1 775 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 PALB2Q86YC2 1186 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 GLYCTKQ8IVS8 523 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 ZMIZ2Q8NF64 920 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 UBA3Q8TBC4 463 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 KCTD13Q8WZ19 329 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 SPATA17Q96L03 361 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 HSFY1Q96LI6 401 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 CCDC42Q96M95 316 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 PDCL3Q9H2J4 239 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 CRISPLD1Q9H336 500 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 PRDM12Q9H4Q4 367 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 NSUN3Q9H649 340 aaKnown RBP12.17□□□□□ -0.46
GGA3-211ENST00000582232 DMAP1Q9NPF5 467 aaPredicted RBP12.17□□□□□ -0.46
GGA3-211ENST00000582232 KRT82Q9NSB4 513 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 TMEM30AQ9NV96 361 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 ADAMTS1Q9UHI8 967 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 DPP7Q9UHL4 492 aa12.17□□□□□ -0.46
GGA3-211ENST00000582232 A0A087X0T9 212 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 HHLA1C9JL84 531 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 BEST1O76090 585 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 PTMAP06454 111 aaKnown RBP12.16□□□□□ -0.46
GGA3-211ENST00000582232 FAM228BP0C875 321 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 ELF1P32519 619 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 KIF11P52732 1056 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 CACNA2D1P54289 1103 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 MAP3K7CLP57077 242 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 RPL10AP62906 217 aaKnown RBP12.16□□□□□ -0.46
GGA3-211ENST00000582232 RAB41Q5JT25 222 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 TMEM184AQ6ZMB5 413 aa12.16□□□□□ -0.46
GGA3-211ENST00000582232 CCDC149Q6ZUS6 474 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms