RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 SPATA18Q8TC71 538 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 SH3RF2Q8TEC5 729 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 CACTINQ8WUQ7 758 aaKnown RBP22.51■■□□□ 1.19
TSEN54-205ENST00000578415 ACDQ96AP0 544 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 FUBP3Q96I24 572 aaKnown RBP eCLIP22.51■■□□□ 1.19
TSEN54-205ENST00000578415 CBWD1Q9BRT8 395 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 FGFBP2Q9BYJ0 223 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 MTMR12Q9C0I1 747 aa22.51■■□□□ 1.19
TSEN54-205ENST00000578415 LDHAP00338 332 aaKnown RBP22.5■■□□□ 1.19
TSEN54-205ENST00000578415 GARTP22102 1010 aa22.5■■□□□ 1.19
TSEN54-205ENST00000578415 FAM171BQ6P995 826 aa22.5■■□□□ 1.19
TSEN54-205ENST00000578415 LINC00597Q9H2U6 94 aa22.5■■□□□ 1.19
TSEN54-205ENST00000578415 PDE11AQ9HCR9 933 aa22.5■■□□□ 1.19
TSEN54-205ENST00000578415 OLFML3Q9NRN5 406 aa22.5■■□□□ 1.19
TSEN54-205ENST00000578415 FBXO2Q9UK22 296 aaPredicted RBP22.5■■□□□ 1.19
TSEN54-205ENST00000578415 CLIC4Q9Y696 253 aa22.5■■□□□ 1.19
TSEN54-205ENST00000578415 CEP295Q9C0D2 2601 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 BCLAF3A2AJT9 711 aaKnown RBP22.49■■□□□ 1.19
TSEN54-205ENST00000578415 ATP2C2O75185 946 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 RHOBTB1O94844 696 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 CAVIN2O95810 425 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 KRT19P08727 400 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 TCF3P15923 654 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 PCSK1P29120 753 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 LHX1P48742 406 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 RBP5P82980 135 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 ZXDBP98169 803 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 CREB5Q02930 508 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 PSMD2Q13200 908 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 RRAGBQ5VZM2 374 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 LIMS2Q7Z4I7 341 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 EDEM2Q9BV94 578 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 CCDC39Q9UFE4 941 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 ARHGAP26Q9UNA1 814 aa22.49■■□□□ 1.19
TSEN54-205ENST00000578415 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.49■■□□□ 1.19
TSEN54-205ENST00000578415 ZNF638Q14966 1978 aaKnown RBP22.49■■□□□ 1.19
TSEN54-205ENST00000578415 CHD6Q8TD26 2715 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 ANTXRLA6NF34 631 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 MAGEA11P43364 429 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 DGKEP52429 567 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 KCNB1Q14721 858 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 GAB4Q2WGN9 574 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 LMBRD2Q68DH5 695 aaPredicted RBP22.48■■□□□ 1.19
TSEN54-205ENST00000578415 PSAPL1Q6NUJ1 521 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 SV2BQ7L1I2 683 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 FSIP1Q8NA03 581 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 USP33Q8TEY7 942 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 KBTBD7Q8WVZ9 684 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 PCIF1Q9H4Z3 704 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 INVSQ9Y283 1065 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 PCDHB13Q9Y5F0 798 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 PTPRJQ12913 1337 aa22.48■■□□□ 1.19
TSEN54-205ENST00000578415 FRMD3A2A2Y4 597 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 TMEM191BP0C7N4 346 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 HDCP19113 662 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 LMO2P25791 158 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 OPRD1P41143 372 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 PSMC1P62191 440 aaKnown RBP22.47■■□□□ 1.19
TSEN54-205ENST00000578415 NR1H3Q13133 447 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 SYCP3Q8IZU3 236 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 TSTD1Q8NFU3 115 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 MYLPFQ96A32 169 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 CLIC6Q96NY7 704 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 SYT15Q9BQS2 421 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 CRTAC1Q9NQ79 661 aa22.47■■□□□ 1.19
TSEN54-205ENST00000578415 SRPRBQ9Y5M8 271 aaKnown RBP22.47■■□□□ 1.19
TSEN54-205ENST00000578415 LNP1A1A4G5 178 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 C4orf47A7E2U8 309 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 K7EQS6 105 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 IDEP14735 1019 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 GBP1P32455 592 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 USP46P62068 366 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 ALCAMQ13740 583 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 PMS2CLQ68D20 193 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 C4orf50Q6ZRC1 276 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 OR5B17Q8NGF7 314 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 NOC3LQ8WTT2 800 aaKnown RBP22.46■■□□□ 1.19
TSEN54-205ENST00000578415 SPATA17Q96L03 361 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 TPSD1Q9BZJ3 242 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 INTS13Q9NVM9 706 aa22.46■■□□□ 1.19
TSEN54-205ENST00000578415 GIPC1O14908 333 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 NFATC1O95644 943 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 BDNFP23560 247 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 SEC13P55735 322 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 C2orf27AQ580R0 203 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 VSTM1Q6UX27 236 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 DPH6Q7L8W6 267 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 RASSF3Q86WH2 238 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 GPD1LQ8N335 351 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 HPDLQ96IR7 371 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 MAGEC2Q9UBF1 373 aaPredicted RBP22.45■■□□□ 1.18
TSEN54-205ENST00000578415 CDH9Q9ULB4 789 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 LAMA1P25391 3075 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 KIAA1549LQ6ZVL6 1849 aa22.45■■□□□ 1.18
TSEN54-205ENST00000578415 VPS37CA5D8V6 355 aaPredicted RBP22.44■■□□□ 1.18
TSEN54-205ENST00000578415 LEFTY2O00292 366 aa22.44■■□□□ 1.18
TSEN54-205ENST00000578415 PRPF6O94906 941 aaKnown RBP22.44■■□□□ 1.18
TSEN54-205ENST00000578415 BCKDHBP21953 392 aa22.44■■□□□ 1.18
TSEN54-205ENST00000578415 NOVA1P51513 510 aaKnown RBP22.44■■□□□ 1.18
TSEN54-205ENST00000578415 MYO1EQ12965 1108 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms