RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 GZF1Q9H116 711 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 TRPC7Q9HCX4 862 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 GMEB2Q9UKD1 530 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PCDHA7Q9UN72 937 aa17.8■□□□□ 0.44
CDK5RAP3-206ENST00000578018 KIAA1549LQ6ZVL6 1849 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SDK1Q7Z5N4 2213 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CLIC2O15247 247 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 TNNI1P19237 187 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 TGM1P22735 817 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 HOXA6P31267 233 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 ME1P48163 572 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 FAM160A1Q05DH4 1040 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PKP1Q13835 747 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 MTF1Q14872 753 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 ZNF77Q15935 545 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 LPAL2Q16609 132 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 LAIR1Q6GTX8 287 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 FSTL4Q6MZW2 842 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CC2D1AQ6P1N0 951 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PKN3Q6P5Z2 889 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 VSTM1Q6UX27 236 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 HS2ST1Q7LGA3 356 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 DGLUCYQ7Z3D6 616 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 C12orf56Q8IXR9 622 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 XXYLT1Q8NBI6 393 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CCDC127Q96BQ5 260 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 FNBP1Q96RU3 617 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 MMS19Q96T76 1030 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PARD6AQ9NPB6 346 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 FAM13BQ9NYF5 915 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 MAGEC2Q9UBF1 373 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 RAB23Q9ULC3 237 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 NME7Q9Y5B8 376 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 MYO16Q9Y6X6 1858 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 RALGAPA1Q6GYQ0 2036 aa17.79■□□□□ 0.44
CDK5RAP3-206ENST00000578018 TRAV19A0A0A6YYK7 116 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PVALEFA0A1B0GWK0 134 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 TRDMT1O14717 391 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CST3P01034 146 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CKMP06732 381 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 HSP90AA1P07900 732 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PDGFRBP09619 1106 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 USP17L7P0C7H9 530 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 BDNFP23560 247 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 HOXC13P31276 330 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CUL4BQ13620 913 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PDGFRLQ15198 375 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 RSPO4Q2I0M5 234 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PRR23BQ6ZRT6 265 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 LONP2Q86WA8 852 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 PCED1BQ96HM7 432 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SPATA17Q96L03 361 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CEP295NLQ96MC4 621 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CYP2S1Q96SQ9 504 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 MRPL45Q9BRJ2 306 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SLC39A2Q9NP94 309 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 GCNT4Q9P109 453 aa17.78■□□□□ 0.44
CDK5RAP3-206ENST00000578018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 C2orf78A6NCI8 922 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 HRO43593 1189 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 TACC1O75410 805 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CNR2P34972 360 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 AFMP43652 599 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 USP46P62068 366 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CYP27A1Q02318 531 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 LMNB2Q03252 620 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 GRSF1Q12849 480 aaKnown RBP eCLIP17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SRSF5Q13243 272 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SIM2Q14190 667 aaPredicted RBP17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 MDH1BQ5I0G3 518 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 HEATR6Q6AI08 1181 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 ATL3Q6DD88 541 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 GRAMD1CQ8IYS0 662 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 FSIP1Q8NA03 581 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 MYCBPAPQ8TBZ2 947 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 ZNF516Q92618 1163 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 SNX25Q9H3E2 840 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 CGNQ9P2M7 1197 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 USP18Q9UMW8 372 aa17.77■□□□□ 0.44
CDK5RAP3-206ENST00000578018 EML5Q05BV3 1969 aa17.77■□□□□ 0.43
CDK5RAP3-206ENST00000578018 MED19A0JLT2 244 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 STAU1O95793 577 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 GRIK1P39086 918 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 MYL6P60660 151 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 TNNC1P63316 161 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 DNM1Q05193 864 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 KCNB1Q14721 858 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 KNOP1Q1ED39 458 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 WDR72Q3MJ13 1102 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 NAIF1Q69YI7 327 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 DENND5BQ6ZUT9 1274 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 CPA6Q8N4T0 437 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 ARL14EPQ8N8R7 260 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 OSCP1Q8WVF1 389 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 TTLL2Q9BWV7 592 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 XYLT2Q9H1B5 865 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 ECT2Q9H8V3 914 aa17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 FBRSL1Q9HCM7 1045 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 DUS2Q9NX74 493 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-206ENST00000578018 CFAP45Q9UL16 551 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms