RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 PMLP29590 882 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 MAGEA11P43364 429 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 CASP5P51878 434 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 NR1H3Q13133 447 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 PSMD2Q13200 908 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 ALCAMQ13740 583 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 KCNB1Q14721 858 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 EML3Q32P44 896 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 ARL14EPQ8N8R7 260 aaPredicted RBP12.66□□□□□ -0.38
CDH8-202ENST00000577228 FSIP1Q8NA03 581 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 CXorf38Q8TB03 319 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 SH3RF2Q8TEC5 729 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 EZH1Q92800 747 aaPredicted RBP12.66□□□□□ -0.38
CDH8-202ENST00000577228 CBWD1Q9BRT8 395 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 MTMR12Q9C0I1 747 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 DUSP15Q9H1R2 295 aaPredicted RBP12.66□□□□□ -0.38
CDH8-202ENST00000577228 UPF2Q9HAU5 1272 aaKnown RBP12.66□□□□□ -0.38
CDH8-202ENST00000577228 PDE11AQ9HCR9 933 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 OLFML3Q9NRN5 406 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 GCNT4Q9P109 453 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 SIX4Q9UIU6 781 aa12.66□□□□□ -0.38
CDH8-202ENST00000577228 FBXO2Q9UK22 296 aaPredicted RBP12.66□□□□□ -0.38
CDH8-202ENST00000577228 R3HCC1Q9Y3T6 440 aaKnown RBP12.66□□□□□ -0.38
CDH8-202ENST00000577228 C2orf78A6NCI8 922 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 GABRDO14764 452 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 DCLK1O15075 740 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 CREB5Q02930 508 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 SOWAHAQ2M3V2 549 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 RNF43Q68DV7 783 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 SCARA3Q6AZY7 606 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 TCEAL6Q6IPX3 200 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 C4orf50Q6ZRC1 276 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 CCDC26Q8TAB7 109 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 TCEAL3Q969E4 200 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 ANKRD36BP1Q96IX9 119 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 SYT15Q9BQS2 421 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 FGFBP2Q9BYJ0 223 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 PCIF1Q9H4Z3 704 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 EBF1Q9UH73 591 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 ARHGAP26Q9UNA1 814 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 SRPRBQ9Y5M8 271 aaKnown RBP12.65□□□□□ -0.38
CDH8-202ENST00000577228 GTF3C3Q9Y5Q9 886 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 EML5Q05BV3 1969 aa12.65□□□□□ -0.38
CDH8-202ENST00000577228 NFATC1O95644 943 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 TNNC2P02585 160 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 TCF3P15923 654 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 HDCP19113 662 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 GBP1P32455 592 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 STAT6P42226 847 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 PDE6CP51160 858 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 DGKEP52429 567 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 PSMC1P62191 440 aaKnown RBP12.64□□□□□ -0.39
CDH8-202ENST00000577228 SHC2P98077 582 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 MYO1EQ12965 1108 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 LMBRD2Q68DH5 695 aaPredicted RBP12.64□□□□□ -0.39
CDH8-202ENST00000577228 FAM171BQ6P995 826 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 CCDC73Q6ZRK6 1079 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 GPD1LQ8N335 351 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 TSTD1Q8NFU3 115 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 MYLPFQ96A32 169 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 HPDLQ96IR7 371 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 CLIC6Q96NY7 704 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 EDEM2Q9BV94 578 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 LSM14BQ9BX40 385 aaKnown RBP12.64□□□□□ -0.39
CDH8-202ENST00000577228 PANK4Q9NVE7 773 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 MAGEC2Q9UBF1 373 aaPredicted RBP12.64□□□□□ -0.39
CDH8-202ENST00000577228 CDH9Q9ULB4 789 aa12.64□□□□□ -0.39
CDH8-202ENST00000577228 USP24Q9UPU5 2620 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 FRMD3A2A2Y4 597 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 BCLAF3A2AJT9 711 aaKnown RBP12.63□□□□□ -0.39
CDH8-202ENST00000577228 KIAA0391O15091 583 aaKnown RBP12.63□□□□□ -0.39
CDH8-202ENST00000577228 ATP2C2O75185 946 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
CDH8-202ENST00000577228 KCNK5O95279 499 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 CAVIN2O95810 425 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 PDCP20941 246 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 ANXA13P27216 316 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 MAPRE1Q15691 268 aaKnown RBP12.63□□□□□ -0.39
CDH8-202ENST00000577228 VSTM1Q6UX27 236 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 DPH6Q7L8W6 267 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 USP33Q8TEY7 942 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 KBTBD7Q8WVZ9 684 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 SPATA17Q96L03 361 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 LINC00597Q9H2U6 94 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 INTS13Q9NVM9 706 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 TRPM5Q9NZQ8 1165 aa12.63□□□□□ -0.39
CDH8-202ENST00000577228 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 ZNF233A6NK53 670 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 PDGFRBP09619 1106 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 PFKLP17858 780 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 BDNFP23560 247 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 LMO2P25791 158 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 GRIK1P39086 918 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 OPRD1P41143 372 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 SEC13P55735 322 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 CYP27A1Q02318 531 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 CEBPZQ03701 1054 aaKnown RBP12.62□□□□□ -0.39
CDH8-202ENST00000577228 SURF1Q15526 300 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 DUOXA2Q1HG44 320 aa12.62□□□□□ -0.39
CDH8-202ENST00000577228 USP39Q53GS9 565 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms