RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PRSS36Q5K4E3 855 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 PPP1R26Q5T8A7 1209 aaPredicted RBP8.41□□□□□ -1.06
CCDC40-215ENST00000576033 TPGS2Q68CL5 300 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 IQCEQ6IPM2 695 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 TMEM150AQ86TG1 271 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 SPATA2LQ8IUW3 424 aaPredicted RBP8.41□□□□□ -1.06
CCDC40-215ENST00000576033 EHBP1Q8NDI1 1231 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 ZMIZ2Q8NF64 920 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 CMASQ8NFW8 434 aaPredicted RBP8.41□□□□□ -1.06
CCDC40-215ENST00000576033 MYCBPAPQ8TBZ2 947 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 ATXN2LQ8WWM7 1075 aaKnown RBP8.41□□□□□ -1.06
CCDC40-215ENST00000576033 RSAD2Q8WXG1 361 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 TFAP2BQ92481 460 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 TAF4BQ92750 862 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 ZSWIM3Q96MP5 696 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 NT5C1BQ96P26 610 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 KCNK16Q96T55 309 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 UHRF1Q96T88 793 aaPredicted RBP8.41□□□□□ -1.06
CCDC40-215ENST00000576033 SMOQ99835 787 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 MED10Q9BTT4 135 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 GPR88Q9GZN0 384 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 SMG9Q9H0W8 520 aaKnown RBP8.41□□□□□ -1.06
CCDC40-215ENST00000576033 PLEKHA4Q9H4M7 779 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 PIDD1Q9HB75 910 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 ZDHHC7Q9NXF8 308 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 IFNKQ9P0W0 207 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 MAGEC2Q9UBF1 373 aaPredicted RBP8.41□□□□□ -1.06
CCDC40-215ENST00000576033 MAGED2Q9UNF1 606 aaPredicted RBP8.41□□□□□ -1.06
CCDC40-215ENST00000576033 PCDHB5Q9Y5E4 795 aa8.41□□□□□ -1.06
CCDC40-215ENST00000576033 USP34Q70CQ2 3546 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 A0A1B0GTH6 734 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 A0A1W2PRU2 124 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 SLC38A8A6NNN8 435 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 F8VP50 259 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 PIK3R2O00459 728 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 CBFA2T2O43439 604 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 NOL4O94818 638 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 PAPLNO95428 1278 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 FGFR1OPO95684 399 aaKnown RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 HMGA1P17096 107 aaKnown RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 HOXB8P17481 243 aaPredicted RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 FSHRP23945 695 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 EEF1GP26641 437 aaKnown RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 PCSK1P29120 753 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 PBX1P40424 430 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 MAP3K7CLP57077 242 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 PLCB2Q00722 1185 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 TEAD2Q15562 447 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 EXOC3L4Q17RC7 722 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 GOLGA7BQ2TAP0 167 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 PABPC1LQ4VXU2 614 aaKnown RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 WDR44Q5JSH3 913 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 CES5AQ6NT32 575 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 TMEM270Q6UE05 265 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 CCDC186Q7Z3E2 898 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 TTC30AQ86WT1 665 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 VSTM4Q8IW00 320 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 DCP1BQ8IZD4 617 aaKnown RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 RBBP8NLQ8NC74 664 aaPredicted RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 RIN3Q8TB24 985 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 SHKBP1Q8TBC3 707 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 NAP1L5Q96NT1 182 aaPredicted RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 RPP25Q9BUL9 199 aaKnown RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 GANQ9H2C0 597 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 IL21Q9HBE4 155 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 WDR6Q9NNW5 1121 aaKnown RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 UBE2TQ9NPD8 197 aaPredicted RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 LIMA1Q9UHB6 759 aaKnown RBP8.4□□□□□ -1.06
CCDC40-215ENST00000576033 SIK3Q9Y2K2 1263 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 PCDHB4Q9Y5E5 795 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 DMDP11532 3685 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 TICRRQ7Z2Z1 1910 aa8.4□□□□□ -1.06
CCDC40-215ENST00000576033 LGALS16A8MUM7 142 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 HHLA1C9JL84 531 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 NARSO43776 548 aaKnown RBP8.39□□□□□ -1.07
CCDC40-215ENST00000576033 AP1G2O75843 785 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 PTMAP06454 111 aaKnown RBP8.39□□□□□ -1.07
CCDC40-215ENST00000576033 HNRNPA1P09651 372 aaKnown RBP eCLIP8.39□□□□□ -1.07
CCDC40-215ENST00000576033 P4HA1P13674 534 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 PAX3P23760 479 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 GABRR2P28476 465 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 HOXA9P31269 272 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 GBP2P32456 591 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-215ENST00000576033 GRIK1P39086 918 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 ZNF132P52740 706 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 ITIH3Q06033 890 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 TBX2Q13207 712 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-215ENST00000576033 NR1I3Q14994 352 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 SYCP1Q15431 976 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 CFAP221Q4G0U5 840 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 IER5LQ5T953 404 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 GBP6Q6ZN66 633 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 CLEC20AQ6ZU45 233 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 CCDC149Q6ZUS6 474 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 GAREM2Q75VX8 874 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 DNAJB7Q7Z6W7 309 aaPredicted RBP8.39□□□□□ -1.07
CCDC40-215ENST00000576033 FAM114A1Q8IWE2 563 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 NPAS3Q8IXF0 933 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 SPC24Q8NBT2 197 aa8.39□□□□□ -1.07
CCDC40-215ENST00000576033 CCDC150Q8NCX0 1101 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms