RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 CPA1P15085 419 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 FDXRP22570 491 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 MST1P26927 711 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ABCD3P28288 659 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 SLC5A2P31639 672 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 SLC6A4P31645 630 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 PGM1P36871 562 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 MC3RP41968 323 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 PAFAH1B1P43034 410 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ETV4P43268 484 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 GZMKP49863 264 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 MRE11P49959 708 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ITGA1P56199 1179 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 BPIFB4P59827 614 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 RAP2BP61225 183 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 DLG4P78352 724 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ATP2C1P98194 919 aaPredicted RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 SATB1Q01826 763 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ROR1Q01973 937 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 GALNT2Q10471 571 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 TOP3AQ13472 1001 aaPredicted RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 MAMLD1Q13495 774 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ATP1A4Q13733 1029 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 EIF4A2Q14240 407 aaKnown RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 GRM4Q14833 912 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 UBXN2BQ14CS0 331 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 RTP5Q14D33 572 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 IQCB1Q15051 598 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 PCOLCEQ15113 449 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 PLCB4Q15147 1175 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 GPR68Q15743 365 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 BAK1Q16611 211 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 BTBD16Q32M84 506 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ZNF750Q32MQ0 723 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 TRIM60Q495X7 471 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 CTXN3Q4LDR2 81 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 TTC22Q5TAA0 569 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 NAA35Q5VZE5 725 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ZKSCAN2Q63HK3 967 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 OLFML2BQ68BL8 750 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 KRT40Q6A162 431 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 INTS5Q6P9B9 1019 aaKnown RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 TRMT10BQ6PF06 316 aaKnown RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 RINLQ6ZS11 566 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 SYT13Q7L8C5 426 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 KCTD20Q7Z5Y7 419 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 FRMD5Q7Z6J6 570 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 CPLX4Q7Z7G2 160 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 B3GNT8Q7Z7M8 397 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 GAS2L3Q86XJ1 694 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 CREBRFQ8IUR6 639 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 RPAP2Q8IXW5 612 aaPredicted RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 ZDHHC14Q8IZN3 488 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 TTLL6Q8N841 843 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 DNERQ8NFT8 737 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 SMARCC2Q8TAQ2 1214 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 KCNG4Q8TDN1 519 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ABHD5Q8WTS1 349 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 STAMQ92783 540 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 KCNN1Q92952 543 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 CUL5Q93034 780 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 LPPQ93052 612 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ATP2A3Q93084 1043 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 ATP6V1E2Q96A05 226 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 SLC7A6OSQ96CW6 309 aaPredicted RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 CEP95Q96GE4 821 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 INTS4Q96HW7 963 aaKnown RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 ASB2Q96Q27 587 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 SLF1Q9BQI6 1058 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 MESP1Q9BRJ9 268 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 IMPG2Q9BZV3 1241 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 KATNBL1Q9H079 304 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 KCNH6Q9H252 994 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 SLC25A32Q9H2D1 315 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 NELFAQ9H3P2 528 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 PRDM13Q9H4Q3 707 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 PLSCR4Q9NRQ2 329 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 MRGBPQ9NV56 204 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 FBXO34Q9NWN3 711 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 NCDNQ9UBB6 729 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 CFDP1Q9UEE9 299 aaPredicted RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 ADD3Q9UEY8 706 aaKnown RBP2.34□□□□□ -2.03
CHD3-217ENST00000574022 GIMAP2Q9UG22 337 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 KCND3Q9UK17 655 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 CTNND2Q9UQB3 1225 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 DNAJC16Q9Y2G8 782 aa2.34□□□□□ -2.03
CHD3-217ENST00000574022 IRS2Q9Y4H2 1338 aa2.34□□□□□ -2.04
CHD3-217ENST00000574022 hCG_1807616A0A1W2PRN6 198 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 BICDL2A1A5D9 508 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 VWA3AA6NCI4 1184 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 FAM90A18PA6NE21 464 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 FAM90A16PA6NEW6 464 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 OR2W5A6NFC9 320 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 FAM90A9PA6NNJ1 464 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 FAM90A5PA8MXJ8 464 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 CXorf49A8MYA2 514 aaPredicted RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 STX16-NPEPL1H3BU86 382 aa2.33□□□□□ -2.04
CHD3-217ENST00000574022 GTPBP1O00178 669 aaKnown RBP2.33□□□□□ -2.04
CHD3-217ENST00000574022 STX16O14662 325 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms