RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 POLR3BQ9NW08 1133 aaPredicted RBP19.38■□□□□ 0.69
CHD3-214ENST00000572579 DMAC2Q9NW81 257 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 FAM13BQ9NYF5 915 aa19.38■□□□□ 0.69
CHD3-214ENST00000572579 UBE4BO95155 1302 aa19.37■□□□□ 0.69
CHD3-214ENST00000572579 SOBPA7XYQ1 873 aa19.37■□□□□ 0.69
CHD3-214ENST00000572579 TNNI1P19237 187 aa19.37■□□□□ 0.69
CHD3-214ENST00000572579 AVPR1AP37288 418 aa19.37■□□□□ 0.69
CHD3-214ENST00000572579 SNRPFP62306 86 aaKnown RBP19.37■□□□□ 0.69
CHD3-214ENST00000572579 SRSF5Q13243 272 aaKnown RBP19.37■□□□□ 0.69
CHD3-214ENST00000572579 RUNX3Q13761 415 aa19.37■□□□□ 0.69
CHD3-214ENST00000572579 FSTL4Q6MZW2 842 aa19.37■□□□□ 0.69
CHD3-214ENST00000572579 MMS19Q96T76 1030 aa19.37■□□□□ 0.69
CHD3-214ENST00000572579 IER2Q9BTL4 223 aa19.37■□□□□ 0.69
CHD3-214ENST00000572579 FAM126AQ9BYI3 521 aaPredicted RBP19.37■□□□□ 0.69
CHD3-214ENST00000572579 SMG5Q9UPR3 1016 aaKnown RBP19.37■□□□□ 0.69
CHD3-214ENST00000572579 HPSEQ9Y251 543 aa19.37■□□□□ 0.69
CHD3-214ENST00000572579 A0A1B0GVL5 298 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 CHURC1-FNTBB4DL54 471 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 TACC1O75410 805 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 PDIA4P13667 645 aaKnown RBP19.36■□□□□ 0.69
CHD3-214ENST00000572579 GNL1P36915 607 aaPredicted RBP19.36■□□□□ 0.69
CHD3-214ENST00000572579 FNTBP49356 437 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 CCR3P51677 355 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 CLDN10P78369 228 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 ZNF268Q14587 947 aaPredicted RBP19.36■□□□□ 0.69
CHD3-214ENST00000572579 ZNF77Q15935 545 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 KMT5BQ4FZB7 885 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 TMEM196Q5HYL7 178 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 TDRD10Q5VZ19 366 aaKnown RBP19.36■□□□□ 0.69
CHD3-214ENST00000572579 ARL14EPQ8N8R7 260 aaPredicted RBP19.36■□□□□ 0.69
CHD3-214ENST00000572579 MYCBPAPQ8TBZ2 947 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 MRPS31Q92665 395 aaKnown RBP19.36■□□□□ 0.69
CHD3-214ENST00000572579 SPATA17Q96L03 361 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 LINC00597Q9H2U6 94 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 KCTD10Q9H3F6 313 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 PARD6AQ9NPB6 346 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 THG1LQ9NWX6 298 aaKnown RBP19.36■□□□□ 0.69
CHD3-214ENST00000572579 MAGEC2Q9UBF1 373 aaPredicted RBP19.36■□□□□ 0.69
CHD3-214ENST00000572579 ZMYM5Q9UJ78 669 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 CFAP45Q9UL16 551 aa19.36■□□□□ 0.69
CHD3-214ENST00000572579 CACNA1AO00555 2505 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 PAPSS2O95340 614 aaPredicted RBP19.35■□□□□ 0.69
CHD3-214ENST00000572579 C4BPAP04003 597 aaKnown RBP19.35■□□□□ 0.69
CHD3-214ENST00000572579 HSP90AA1P07900 732 aaKnown RBP19.35■□□□□ 0.69
CHD3-214ENST00000572579 PFKFB1P16118 471 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 CMA1P23946 247 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 CDH8P55286 799 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 DLG4P78352 724 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 LPAL2Q16609 132 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 WDR72Q3MJ13 1102 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 MDH1BQ5I0G3 518 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 DGKKQ5KSL6 1271 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 C1orf228Q6PIY5 440 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 HS2ST1Q7LGA3 356 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 PARD3BQ8TEW8 1205 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 EZH1Q92800 747 aaPredicted RBP19.35■□□□□ 0.69
CHD3-214ENST00000572579 FNBP1Q96RU3 617 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 HINFPQ9BQA5 517 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 SDCBP2Q9H190 292 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 TRPC7Q9HCX4 862 aa19.35■□□□□ 0.69
CHD3-214ENST00000572579 TCHHQ07283 1943 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 ANTXRLA6NF34 631 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 LRRIQ3A6PVS8 624 aaPredicted RBP19.34■□□□□ 0.69
CHD3-214ENST00000572579 CLDN5O00501 218 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 TRDMT1O14717 391 aaKnown RBP19.34■□□□□ 0.69
CHD3-214ENST00000572579 VNN1O95497 513 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 STAU1O95793 577 aaKnown RBP19.34■□□□□ 0.69
CHD3-214ENST00000572579 PTPN1P18031 435 aaKnown RBP19.34■□□□□ 0.69
CHD3-214ENST00000572579 GALK1P51570 392 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 CYP27A1Q02318 531 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 FAM160A1Q05DH4 1040 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 LRRC32Q14392 662 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 C1orf220Q5T0J3 134 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 VSTM1Q6UX27 236 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 C4orf50Q6ZRC1 276 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 OR6B3Q8NGW1 331 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 TTLL2Q9BWV7 592 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 B3GNT5Q9BYG0 378 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 ZNF518BQ9C0D4 1074 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 RNF38Q9H0F5 515 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 SMYD3Q9H7B4 428 aa19.34■□□□□ 0.69
CHD3-214ENST00000572579 UXTQ9UBK9 157 aaPredicted RBP19.34■□□□□ 0.69
CHD3-214ENST00000572579 NXF1Q9UBU9 619 aaKnown RBP19.34■□□□□ 0.69
CHD3-214ENST00000572579 NUP210Q8TEM1 1887 aaPredicted RBP19.33■□□□□ 0.69
CHD3-214ENST00000572579 F8VP50 259 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 EXOC3O60645 756 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 EGFP01133 1207 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 FAM163BP0C2L3 166 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 PRR29P0C7W0 189 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 GJA4P35212 333 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 GRIK1P39086 918 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 USP4Q13107 963 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 HEATR6Q6AI08 1181 aaKnown RBP19.33■□□□□ 0.68
CHD3-214ENST00000572579 PAQR9Q6ZVX9 377 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 TMEM174Q8WUU8 243 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 SNX25Q9H3E2 840 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 KIF9Q9HAQ2 790 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 DLL3Q9NYJ7 618 aa19.33■□□□□ 0.68
CHD3-214ENST00000572579 CGNQ9P2M7 1197 aaKnown RBP19.33■□□□□ 0.68
CHD3-214ENST00000572579 R3HCC1Q9Y3T6 440 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms