RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 PIK3CAP42336 1068 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 NRLP54845 237 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 ELAVL2Q12926 359 aaKnown RBP22.99■■□□□ 1.27
UBFD1-210ENST00000571064 GRM2Q14416 872 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 KRT31Q15323 416 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 MAN2A1Q16706 1144 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 SPOPLQ6IQ16 392 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 DSTYKQ6XUX3 929 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.99■■□□□ 1.27
UBFD1-210ENST00000571064 CELF5Q8N6W0 485 aaKnown RBP22.99■■□□□ 1.27
UBFD1-210ENST00000571064 VRTNQ9H8Y1 702 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.99■■□□□ 1.273e-6■■■■■ 178.4
UBFD1-210ENST00000571064 GDAP2Q9NXN4 497 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 TAB2Q9NYJ8 693 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 GDE1Q9NZC3 331 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 LIMA1Q9UHB6 759 aaKnown RBP22.99■■□□□ 1.27
UBFD1-210ENST00000571064 TIMM13Q9Y5L4 95 aaPredicted RBP22.99■■□□□ 1.27
UBFD1-210ENST00000571064 USP24Q9UPU5 2620 aa22.99■■□□□ 1.27
UBFD1-210ENST00000571064 TRAPPC3O43617 180 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 ASS1P00966 412 aaKnown RBP22.98■■□□□ 1.27
UBFD1-210ENST00000571064 PAX3P23760 479 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 ATICP31939 592 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 MYL7Q01449 175 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 VWA3BQ502W6 1294 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 PDXDC1Q6P996 788 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 LIMS2Q7Z4I7 341 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 FBXL13Q8NEE6 735 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 DNASE1L2Q92874 299 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 ELSPBP1Q96BH3 223 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 APOBEC3GQ9HC16 384 aaKnown RBP22.98■■□□□ 1.27
UBFD1-210ENST00000571064 SEMA4GQ9NTN9 838 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 RAB20Q9NX57 234 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 RALYQ9UKM9 306 aaKnown RBP22.98■■□□□ 1.27
UBFD1-210ENST00000571064 CDY1Q9Y6F8 540 aa22.98■■□□□ 1.27
UBFD1-210ENST00000571064 BECN2A8MW95 431 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 NRG2O14511 850 aaPredicted RBP22.97■■□□□ 1.27
UBFD1-210ENST00000571064 CYB561D2O14569 222 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 SYN3O14994 580 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 RETP07949 1114 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 FCARP24071 287 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 MYO1EQ12965 1108 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 SGSM1Q2NKQ1 1148 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 LMO3Q8TAP4 145 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 BRD9Q9H8M2 597 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 LMAN1LQ9HAT1 526 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 MTRRQ9UBK8 725 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 L1RE1Q9UN81 338 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 R3HCC1Q9Y3T6 440 aaKnown RBP22.97■■□□□ 1.27
UBFD1-210ENST00000571064 SNX9Q9Y5X1 595 aa22.97■■□□□ 1.27
UBFD1-210ENST00000571064 F5P12259 2224 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 MAN2B1O00754 1011 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 GDF9O60383 454 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 CYP11A1P05108 521 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 PRKCSHP14314 528 aaPredicted RBP22.96■■□□□ 1.27
UBFD1-210ENST00000571064 KCNA4P22459 653 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 MRPL58Q14197 206 aaKnown RBP22.96■■□□□ 1.27
UBFD1-210ENST00000571064 ZNF699Q32M78 642 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 WSCD1Q658N2 575 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 MAMSTRQ6ZN01 415 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 PRR23CQ6ZRP0 262 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 VPS16Q9H269 839 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 NDST4Q9H3R1 872 aa22.96■■□□□ 1.27
UBFD1-210ENST00000571064 LRRC10BA6NIK2 292 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 P4HA2O15460 535 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 LRP3O75074 770 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 TYMPP19971 482 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 COPB1P53618 953 aaKnown RBP22.95■■□□□ 1.26
UBFD1-210ENST00000571064 SIM2Q14190 667 aaPredicted RBP22.95■■□□□ 1.26
UBFD1-210ENST00000571064 PPP2R5DQ14738 602 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 SOWAHAQ2M3V2 549 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 WDR72Q3MJ13 1102 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 PDCL2Q8N4E4 241 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 FAM3CQ92520 227 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 TAF4BQ92750 862 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 TATDN2Q93075 761 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 TCEAL4Q96EI5 215 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 SDCBP2Q9H190 292 aa22.95■■□□□ 1.26
UBFD1-210ENST00000571064 NXF1Q9UBU9 619 aaKnown RBP22.95■■□□□ 1.26
UBFD1-210ENST00000571064 ODC1P11926 461 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 PTPN2P17706 415 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 CDK11BP21127 795 aaKnown RBP22.94■■□□□ 1.26
UBFD1-210ENST00000571064 CCR3P51677 355 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 SATB1Q01826 763 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 DMWDQ09019 674 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 SRSF5Q13243 272 aaKnown RBP22.94■■□□□ 1.26
UBFD1-210ENST00000571064 CSRP2Q16527 193 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 ZNF667Q5HYK9 610 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 FAM78AQ5JUQ0 283 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 RTL10Q7L3V2 364 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 OSTM1Q86WC4 334 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 GAS2L3Q86XJ1 694 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 TOP6BLQ8N6T0 577 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 EHBP1Q8NDI1 1231 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 TRMT61BQ9BVS5 477 aaKnown RBP22.94■■□□□ 1.26
UBFD1-210ENST00000571064 ZFP14Q9HCL3 533 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 AVENQ9NQS1 362 aaPredicted RBP22.94■■□□□ 1.26
UBFD1-210ENST00000571064 NME7Q9Y5B8 376 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 CHD6Q8TD26 2715 aa22.94■■□□□ 1.26
UBFD1-210ENST00000571064 HRO43593 1189 aa22.93■■□□□ 1.26
UBFD1-210ENST00000571064 OAZ2O95190 189 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms