RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 RBAKQ9NYW8 714 aaPredicted RBP20.36■□□□□ 0.85
SCARF1-204ENST00000570902 ARHGAP26Q9UNA1 814 aa20.36■□□□□ 0.85
SCARF1-204ENST00000570902 SNX9Q9Y5X1 595 aa20.36■□□□□ 0.85
SCARF1-204ENST00000570902 CEP295Q9C0D2 2601 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 KIAA1549LQ6ZVL6 1849 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 PFKLP17858 780 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 HDCP19113 662 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 MAGEA11P43364 429 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 RBP5P82980 135 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 GRIN1Q05586 938 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 ZNF252P-AS1Q0IIN9 211 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 RABEP1Q15276 862 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 UNQ6494/PRO21346Q6UXR6 183 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 C4orf50Q6ZRC1 276 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 DYMQ7RTS9 669 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 SCN4BQ8IWT1 228 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 ADGRF2Q8IZF7 708 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 USP33Q8TEY7 942 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 CNOT6LQ96LI5 555 aaKnown RBP20.35■□□□□ 0.85
SCARF1-204ENST00000570902 CEP295NLQ96MC4 621 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 STRA6Q9BX79 667 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 R3HCC1Q9Y3T6 440 aaKnown RBP20.35■□□□□ 0.85
SCARF1-204ENST00000570902 GTF3C3Q9Y5Q9 886 aa20.35■□□□□ 0.85
SCARF1-204ENST00000570902 C2orf78A6NCI8 922 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 GABRDO14764 452 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 KRT19P08727 400 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 CEACAM1P13688 526 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 GAP43P17677 238 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 GARTP22102 1010 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 C2orf27AQ580R0 203 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 L1TD1Q5T7N2 865 aaKnown RBP20.34■□□□□ 0.85
SCARF1-204ENST00000570902 SH3PXD2AQ5TCZ1 1133 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 CYP2U1Q7Z449 544 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 BRAPQ7Z569 592 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 RASSF3Q86WH2 238 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 SAAL1Q96ER3 474 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 TMX3Q96JJ7 454 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 TPSD1Q9BZJ3 242 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 EHD2Q9NZN4 543 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 STK17AQ9UEE5 414 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 INVSQ9Y283 1065 aa20.34■□□□□ 0.85
SCARF1-204ENST00000570902 MYO16Q9Y6X6 1858 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 GIPC1O14908 333 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 ALDH1A2O94788 518 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 CSRP1P21291 193 aaKnown RBP20.33■□□□□ 0.85
SCARF1-204ENST00000570902 WNT7BP56706 349 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 FOXC1Q12948 553 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 MYO1EQ12965 1108 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 SF3A1Q15459 793 aaKnown RBP20.33■□□□□ 0.85
SCARF1-204ENST00000570902 ANO7Q6IWH7 933 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 FAM171BQ6P995 826 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 DPH6Q7L8W6 267 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 OSTM1Q86WC4 334 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 KIAA1958Q8N8K9 716 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 CXorf38Q8TB03 319 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 SPATA17Q96L03 361 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 LINC00597Q9H2U6 94 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 MAGEC2Q9UBF1 373 aaPredicted RBP20.33■□□□□ 0.85
SCARF1-204ENST00000570902 CCDC39Q9UFE4 941 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 MMP17Q9ULZ9 603 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 PCDHB13Q9Y5F0 798 aa20.33■□□□□ 0.85
SCARF1-204ENST00000570902 FRYQ5TBA9 3013 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 C1QTNF9BB2RNN3 333 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 K7EQS6 105 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 GCNT3O95395 438 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 TMEM191BP0C7N4 346 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 C1QTNF9P0C862 333 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 OPRD1P41143 372 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 SEC13P55735 322 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 MRPS21P82921 87 aaKnown RBP20.32■□□□□ 0.84
SCARF1-204ENST00000570902 KCNA1Q09470 495 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 ALCAMQ13740 583 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 MAPRE1Q15691 268 aaKnown RBP20.32■□□□□ 0.84
SCARF1-204ENST00000570902 VSTM1Q6UX27 236 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 SYCP3Q8IZU3 236 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 TRPM5Q9NZQ8 1165 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 SMC3Q9UQE7 1217 aa20.32■□□□□ 0.84
SCARF1-204ENST00000570902 MYMKA6NI61 221 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 LEFTY2O00292 366 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 ANXA13P27216 316 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 PPP3CCP48454 512 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 CRY1Q16526 586 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 CCDC142Q17RM4 750 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 SOWAHAQ2M3V2 549 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 LARP1BQ659C4 914 aaKnown RBP20.31■□□□□ 0.84
SCARF1-204ENST00000570902 DENND5BQ6ZUT9 1274 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 KDF1Q8NAX2 398 aaPredicted RBP20.31■□□□□ 0.84
SCARF1-204ENST00000570902 ZSWIM2Q8NEG5 633 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 MDGA1Q8NFP4 955 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 EPSTI1Q96J88 318 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 MTMR12Q9C0I1 747 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 OLFML3Q9NRN5 406 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 TBC1D7Q9P0N9 293 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 SIX4Q9UIU6 781 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 CDH9Q9ULB4 789 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 ZMIZ1Q9ULJ6 1067 aa20.31■□□□□ 0.84
SCARF1-204ENST00000570902 TMEM8BA6NDV4 472 aa20.3■□□□□ 0.84
SCARF1-204ENST00000570902 CDX4O14627 284 aaPredicted RBP20.3■□□□□ 0.84
SCARF1-204ENST00000570902 SLC9A3R1O14745 358 aaPredicted RBP20.3■□□□□ 0.84
SCARF1-204ENST00000570902 HCRTO43612 131 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms