RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 ZNF134P52741 427 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 EPHB1P54762 984 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 LINC00205P59089 165 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 DHX8Q14562 1220 aaKnown RBP5.85□□□□□ -1.47
CHD9-220ENST00000569794 KIF22Q14807 665 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 WDR78Q5VTH9 848 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 TTC7BQ86TV6 843 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 FAM9BQ8IZU0 186 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 CNTD1Q8N815 330 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 PRSS3P2Q8NHM4 247 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 RITA1Q96K30 269 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 SLAMF7Q9NQ25 335 aa5.85□□□□□ -1.47
CHD9-220ENST00000569794 WDR17Q8IZU2 1322 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 ALG1L2C9J202 215 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 E5RJQ4 531 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 SOCS2O14508 198 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 MYL1P05976 194 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 ENGP17813 658 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 SMARCA1P28370 1054 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 PHKA1P46020 1223 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 PIK3CGP48736 1102 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 KIF23Q02241 960 aaPredicted RBP5.84□□□□□ -1.47
CHD9-220ENST00000569794 DSC2Q02487 901 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 BOP1Q14137 746 aaKnown RBP5.84□□□□□ -1.47
CHD9-220ENST00000569794 LRRC41Q15345 812 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 TTF1Q15361 905 aaPredicted RBP5.84□□□□□ -1.47
CHD9-220ENST00000569794 NFE2Q16621 373 aaPredicted RBP5.84□□□□□ -1.47
CHD9-220ENST00000569794 ICE2Q659A1 982 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 MIS18BP1Q6P0N0 1132 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 TMEM108Q6UXF1 575 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 TRIM72Q6ZMU5 477 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 DDX42Q86XP3 938 aaKnown RBP eCLIP5.84□□□□□ -1.47
CHD9-220ENST00000569794 NANOGP1Q8N7R0 232 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 GPATCH11Q8N954 259 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 ATL2Q8NHH9 583 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 ZC3H10Q96K80 434 aaKnown RBP5.84□□□□□ -1.47
CHD9-220ENST00000569794 FSD1LQ9BXM9 530 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 FAM126AQ9BYI3 521 aaPredicted RBP5.84□□□□□ -1.47
CHD9-220ENST00000569794 TMX4Q9H1E5 349 aaPredicted RBP5.84□□□□□ -1.47
CHD9-220ENST00000569794 MCM8Q9UJA3 840 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 ADAMTS5Q9UNA0 930 aa5.84□□□□□ -1.47
CHD9-220ENST00000569794 KLHL33A6NCF5 533 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 PCDHGA12O60330 932 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 PRDX5P30044 214 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 FXR1P51114 621 aaKnown RBP eCLIP5.83□□□□□ -1.48
CHD9-220ENST00000569794 LMOD3Q0VAK6 560 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 USP37Q86T82 979 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 FAM90A1Q86YD7 464 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.83□□□□□ -1.48
CHD9-220ENST00000569794 SAMD3Q8N6K7 520 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 NRACQ8N912 160 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 ADAMTS15Q8TE58 950 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 ARPC5LQ9BPX5 153 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 C1orf43Q9BWL3 253 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 ARNT2Q9HBZ2 717 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 TRNAU1APQ9NX07 287 aaKnown RBP5.83□□□□□ -1.48
CHD9-220ENST00000569794 SERPINB13Q9UIV8 391 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 PCDHGA9Q9Y5G4 932 aaKnown RBP5.83□□□□□ -1.48
CHD9-220ENST00000569794 PCDHGA8Q9Y5G5 932 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 PCDHGA7Q9Y5G6 932 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 PCDHGA6Q9Y5G7 932 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 PCDHGA3Q9Y5H0 932 aa5.83□□□□□ -1.48
CHD9-220ENST00000569794 IGKV2D-30A0A075B6S6 120 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 CCDC187A0A096LP49 1063 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 SCGB1D2O95969 90 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 SP2Q02086 613 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 MIDNQ504T8 468 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 SFRP4Q6FHJ7 346 aaPredicted RBP5.82□□□□□ -1.48
CHD9-220ENST00000569794 CLEC4GQ6UXB4 293 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 KSR2Q6VAB6 950 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 IRF2BP2Q7Z5L9 587 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 LRRC71Q8N4P6 559 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 RP9Q8TA86 221 aaKnown RBP5.82□□□□□ -1.48
CHD9-220ENST00000569794 PIGOQ8TEQ8 1089 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 FAXDC2Q96IV6 333 aa5.82□□□□□ -1.48
CHD9-220ENST00000569794 PUS7LQ9H0K6 701 aaKnown RBP5.82□□□□□ -1.48
CHD9-220ENST00000569794 LRRC14BA6NHZ5 514 aa5.81□□□□□ -1.48
CHD9-220ENST00000569794 H7C1Q1 480 aa5.81□□□□□ -1.48
CHD9-220ENST00000569794 MT-CO1P00395 513 aa5.81□□□□□ -1.48
CHD9-220ENST00000569794 FESP07332 822 aa5.81□□□□□ -1.48
CHD9-220ENST00000569794 NPSP0C0P6 89 aa5.81□□□□□ -1.48
CHD9-220ENST00000569794 FTH1P19P0C7X4 201 aa5.81□□□□□ -1.48
CHD9-220ENST00000569794 GTF2H3Q13889 308 aa5.81□□□□□ -1.48
CHD9-220ENST00000569794 FCRL6Q6DN72 434 aa5.81□□□□□ -1.48
CHD9-220ENST00000569794 PARS2Q7L3T8 475 aaKnown RBP5.81□□□□□ -1.48
CHD9-220ENST00000569794 MRPL10Q7Z7H8 261 aaKnown RBP5.81□□□□□ -1.48
CHD9-220ENST00000569794 C14orf80Q86SX3 495 aa5.81□□□□□ -1.48
CHD9-220ENST00000569794 KLHL13Q9P2N7 655 aa5.81□□□□□ -1.48
CHD9-220ENST00000569794 SHTN1A0MZ66 631 aa5.8□□□□□ -1.48
CHD9-220ENST00000569794 M0QYG6 137 aa5.8□□□□□ -1.48
CHD9-220ENST00000569794 IFRD1O00458 451 aaPredicted RBP5.8□□□□□ -1.48
CHD9-220ENST00000569794 NPHP1O15259 732 aa5.8□□□□□ -1.48
CHD9-220ENST00000569794 XPOTO43592 962 aaKnown RBP5.8□□□□□ -1.48
CHD9-220ENST00000569794 FGBP02675 491 aa5.8□□□□□ -1.48
CHD9-220ENST00000569794 PDE1AP54750 535 aa5.8□□□□□ -1.48
CHD9-220ENST00000569794 CHPFQ8IZ52 775 aa5.8□□□□□ -1.48
CHD9-220ENST00000569794 MYO1HQ8N1T3 1032 aa5.8□□□□□ -1.48
CHD9-220ENST00000569794 PAF1Q8N7H5 531 aa5.8□□□□□ -1.48
CHD9-220ENST00000569794 NSMCE1Q8WV22 266 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms