RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 CD4P01730 458 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ITGB3P05106 788 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 KRT19P08727 400 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 KRT7P08729 469 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF286BP0CG31 522 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 SETSIPP0DME0 302 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 SMIM10L2AP0DMW4 78 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 SMIM10L2BP0DMW5 78 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 RALAP11233 206 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 GNAT1P11488 350 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 HOXB1P14653 301 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CD19P15391 556 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 TCF3P15923 654 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CYP3A5P20815 502 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 KLRC2P26717 231 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 RFC1P35251 1148 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 PCK1P35558 622 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 MDH1P40925 334 aaKnown RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CDKN2BP42772 138 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 TM4SF4P48230 202 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 RPL34P49207 117 aaKnown RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CPT1AP50416 773 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CRYBB1P53674 252 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 HNRNPH2P55795 449 aaKnown RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 SNX16P57768 344 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 PSMC1P62191 440 aaKnown RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF252P-AS1Q0IIN9 211 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 MYO1EQ12965 1108 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CALCOCO2Q13137 446 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 PPP1R7Q15435 360 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 TAF1CQ15572 869 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ZSCAN26Q16670 478 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 PTPN20Q4JDL3 420 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 PKDCCQ504Y2 493 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF394Q53GI3 561 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 C2CD6Q53TS8 623 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ARHGAP17Q68EM7 881 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 LLGL2Q6P1M3 1020 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 NOTUMQ6P988 496 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 SLC27A1Q6PCB7 646 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 BLOC1S3Q6QNY0 202 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 MFSD7Q6UXD7 560 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 LEKR1Q6ZMV7 388 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 SPOCD1Q6ZMY3 1216 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ARCQ7LC44 396 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 PHLDB2Q86SQ0 1253 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 TMEM110Q86TL2 294 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CDR2LQ86X02 465 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 VSIG1Q86XK7 387 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 XYLT1Q86Y38 959 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 NPAS4Q8IUM7 802 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CRYBG2Q8N1P7 616 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ARFGAP1Q8N6T3 406 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CCHCR1Q8TD31 782 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 IPO4Q8TEX9 1081 aaKnown RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 UBLCP1Q8WVY7 318 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 TLCD1Q96CP7 247 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 SNF8Q96H20 258 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CPB2Q96IY4 423 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF668Q96K58 619 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 HEXIM2Q96MH2 286 aaKnown RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 TWNKQ96RR1 684 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 USB1Q9BQ65 265 aaKnown RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 HERPUD2Q9BSE4 406 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 NT5C1AQ9BXI3 368 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 SLC4A5Q9BY07 1137 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 TRIM31Q9BZY9 425 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 SEMA4AQ9H3S1 761 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CYLDQ9NQC7 956 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 AAASQ9NRG9 546 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CHST7Q9NS84 486 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 GDAP2Q9NXN4 497 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CNTN3Q9P232 1028 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 CYTH4Q9UIA0 394 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ZHX1Q9UKY1 873 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 R3HDM2Q9Y2K5 976 aaKnown RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ATP8A1Q9Y2Q0 1164 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 PCDHB9Q9Y5E1 797 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.67□□□□□ -1.5
SF3B3-213ENST00000569687 ZNF236Q9UL36 1845 aa5.67□□□□□ -1.5
SF3B3-213ENST00000569687 hCG_1818297A0A087WSY0 165 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 C2CD4BA6NLJ0 364 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 RIPK2O43353 540 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 LIASO43766 372 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 LZTS3O60299 673 aaPredicted RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 GJB6O95452 261 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 TRUB2O95900 331 aaKnown RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 RPLP2P05387 115 aaKnown RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ITGAVP06756 1048 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 PFKMP08237 780 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 CYP2C9P11712 490 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ATF7P17544 494 aaPredicted RBP5.66□□□□□ -1.5
SF3B3-213ENST00000569687 NR1D1P20393 614 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 YY1P25490 414 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 PSMA2P25787 234 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 CTHP32929 405 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 ADCY8P40145 1251 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 RGS2P41220 211 aa5.66□□□□□ -1.5
SF3B3-213ENST00000569687 PNPLA4P41247 253 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms