RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 DSTYKQ6XUX3 929 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 DEFB128Q7Z7B8 93 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 NLRC5Q86WI3 1866 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 RHOT1Q8IXI2 618 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 ABI1Q8IZP0 508 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 MYCBPAPQ8TBZ2 947 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 LINC01599Q8WXQ3 324 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 FUBP3Q96I24 572 aaKnown RBP eCLIP10.03□□□□□ -0.8
LINC00555-201ENST00000569288 FAM84AQ96KN4 292 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 FAM193BQ96PV7 902 aaPredicted RBP10.03□□□□□ -0.8
LINC00555-201ENST00000569288 TWNKQ96RR1 684 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 CARD6Q9BX69 1037 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 CXCL16Q9H2A7 254 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 CSNK1G1Q9HCP0 422 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 OSGEPQ9NPF4 335 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 COMMD8Q9NX08 183 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 RRN3Q9NYV6 651 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 FEZ2Q9UHY8 353 aaPredicted RBP10.03□□□□□ -0.8
LINC00555-201ENST00000569288 TSPAN16Q9UKR8 245 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 TFR2Q9UP52 801 aa10.03□□□□□ -0.8
LINC00555-201ENST00000569288 TDRD15B5MCY1 1934 aaKnown RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 OR6C75A6NL08 312 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 DPYSL4O14531 572 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 ENC1O14682 589 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 PPEF2O14830 753 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 DDX3YO15523 660 aaKnown RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 CLSTN1O94985 981 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 KRT7P08729 469 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 ACRP10323 421 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 COMTP21964 271 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 PTPN7P35236 360 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 SHHQ15465 462 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 NFE2Q16621 373 aaPredicted RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 TIGD5Q53EQ6 642 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 ZNF394Q53GI3 561 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 EFHC1Q5JVL4 640 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 CLLU1OSQ5K130 101 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 PPP1R26Q5T8A7 1209 aaPredicted RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 CCDC181Q5TID7 509 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 WSCD1Q658N2 575 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 DENND1BQ6P3S1 775 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 DCUN1D2Q6PH85 259 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 SCARA5Q6ZMJ2 495 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 MMS22LQ6ZRQ5 1243 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 MTERF4Q7Z6M4 381 aaKnown RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 XYLT1Q86Y38 959 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 PSTKQ8IV42 348 aaKnown RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 KATNAL2Q8IYT4 538 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 RCOR2Q8IZ40 523 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 DCP1BQ8IZD4 617 aaKnown RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 SPATA4Q8NEY3 305 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 EXD1Q8NHP7 514 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 C2orf15Q8WU43 125 aaKnown RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 IRGQQ8WZA9 623 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 CASD1Q96PB1 797 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 SLC9A7Q96T83 725 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 TBCBQ99426 244 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 CNPY3Q9BT09 278 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 FRMD8P1Q9BZ68 369 aaPredicted RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 OSBPL7Q9BZF2 842 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 RNF19AQ9NV58 838 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 TBC1D13Q9NVG8 400 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 DDX56Q9NY93 547 aaKnown RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 HSFX1Q9UBD0 423 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 ANAPC7Q9UJX3 599 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 LRFN2Q9ULH4 789 aa10.02□□□□□ -0.81
LINC00555-201ENST00000569288 COLQQ9Y215 455 aaPredicted RBP10.02□□□□□ -0.81
LINC00555-201ENST00000569288 SCN1AP35498 2009 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 UQCRHLA0A096LP55 91 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 MEIS3P2A8K0S8 358 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 H7C4K7 107 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 M0QYV0 167 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 PGRMC1O00264 195 aaKnown RBP10.01□□□□□ -0.81
LINC00555-201ENST00000569288 KCNK3O14649 394 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 ATP8B1O43520 1251 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 ZNF189O75820 626 aaPredicted RBP10.01□□□□□ -0.81
LINC00555-201ENST00000569288 EFEMP2O95967 443 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 C1RP00736 705 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 UQCRHP07919 91 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 FGFR1P11362 822 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 NPR3P17342 541 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 PTPN9P43378 593 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 RAP1GAPP47736 663 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 ZNF143P52747 638 aaPredicted RBP10.01□□□□□ -0.81
LINC00555-201ENST00000569288 AIF1P55008 147 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 WDR5P61964 334 aaKnown RBP10.01□□□□□ -0.81
LINC00555-201ENST00000569288 PSMC1P62191 440 aaKnown RBP10.01□□□□□ -0.81
LINC00555-201ENST00000569288 TSPY1Q01534 308 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 SLC6A3Q01959 620 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 MESDQ14696 234 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 HADHQ16836 314 aaKnown RBP10.01□□□□□ -0.81
LINC00555-201ENST00000569288 PTPN20Q4JDL3 420 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 BOLA3Q53S33 107 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 C9orf50Q5SZB4 431 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 WDR93Q6P2C0 686 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 VSTM1Q6UX27 236 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 C4orf50Q6ZRC1 276 aa10.01□□□□□ -0.81
LINC00555-201ENST00000569288 SLC26A9Q7LBE3 791 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms