RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 ARID5AQ03989 594 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 HYAL1Q12794 435 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 CCDC142Q17RM4 750 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 GOLGA7BQ2TAP0 167 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 MGAT5BQ3V5L5 792 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 PPP1R26Q5T8A7 1209 aaPredicted RBP12.72□□□□□ -0.37
FANCA-231ENST00000568626 TMEM184AQ6ZMB5 413 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 TRIM72Q6ZMU5 477 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 VPS36Q86VN1 386 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 ANKRD52Q8NB46 1076 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 ATAD1Q8NBU5 361 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 TFAP2BQ92481 460 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 SEPT5Q99719 369 aaPredicted RBP12.72□□□□□ -0.37
FANCA-231ENST00000568626 ZNF518BQ9C0D4 1074 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 PNPLA8Q9NP80 782 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 MAN1C1Q9NR34 630 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 NOCTQ9UK39 431 aaKnown RBP12.72□□□□□ -0.37
FANCA-231ENST00000568626 YIPF1Q9Y548 306 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 INSL5Q9Y5Q6 135 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 MTCL1Q9Y4B5 1905 aaKnown RBP12.72□□□□□ -0.37
FANCA-231ENST00000568626 PATJQ8NI35 1801 aa12.72□□□□□ -0.37
FANCA-231ENST00000568626 M0QYV0 167 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 PER2O15055 1255 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 AP1G2O75843 785 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 VNN2O95498 520 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 LSM8O95777 96 aaKnown RBP12.71□□□□□ -0.37
FANCA-231ENST00000568626 SERPING1P05155 500 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 HNRNPA1P09651 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
FANCA-231ENST00000568626 HAPLN1P10915 354 aaPredicted RBP12.71□□□□□ -0.37
FANCA-231ENST00000568626 BDNFP23560 247 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 ALDH1A3P47895 512 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 KLHL30Q0D2K2 578 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 BST2Q10589 180 aaKnown RBP12.71□□□□□ -0.37
FANCA-231ENST00000568626 DUSP4Q13115 394 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 KCNC3Q14003 757 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 VEPH1Q14D04 833 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 PPP1R2P3Q6NXS1 205 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 PAQR9Q6ZVX9 377 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 IRF2BP2Q7Z5L9 587 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 RBM23Q86U06 439 aaKnown RBP12.71□□□□□ -0.37
FANCA-231ENST00000568626 NOP9Q86U38 636 aaKnown RBP12.71□□□□□ -0.37
FANCA-231ENST00000568626 SLC7A14Q8TBB6 771 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 MYLIPQ8WY64 445 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 C8orf48Q96LL4 319 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 NOX5Q96PH1 765 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 DUSP16Q9BY84 665 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 LHX5Q9H2C1 402 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 PDCL3Q9H2J4 239 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 SFXN1Q9H9B4 322 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 CSNK1G1Q9HCP0 422 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 ZDHHC7Q9NXF8 308 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 EHD2Q9NZN4 543 aa12.71□□□□□ -0.37
FANCA-231ENST00000568626 MYO7AQ13402 2215 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 PRRC2BQ5JSZ5 2229 aaKnown RBP12.7□□□□□ -0.38
FANCA-231ENST00000568626 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 XPO1O14980 1071 aaKnown RBP12.7□□□□□ -0.38
FANCA-231ENST00000568626 ZMYND10O75800 440 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 MICAL2O94851 1124 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 LRG1P02750 347 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 EPCAMP16422 314 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 HOXB8P17481 243 aaPredicted RBP12.7□□□□□ -0.38
FANCA-231ENST00000568626 CYP2F1P24903 491 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 GRIK1P39086 918 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 CDK17Q00537 523 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 COL19A1Q14993 1142 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 PKDCCQ504Y2 493 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 TDRD12Q587J7 1177 aaKnown RBP12.7□□□□□ -0.38
FANCA-231ENST00000568626 PPM1LQ5SGD2 360 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 E4F1Q66K89 784 aaPredicted RBP12.7□□□□□ -0.38
FANCA-231ENST00000568626 CYP26C1Q6V0L0 522 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 CLEC20AQ6ZU45 233 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 ITIH5Q86UX2 942 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 TTC30AQ86WT1 665 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 ELMOD1Q8N336 334 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 TC2NQ8N9U0 490 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 MSANTD4Q8NCY6 345 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 CMASQ8NFW8 434 aaPredicted RBP12.7□□□□□ -0.38
FANCA-231ENST00000568626 DDX1Q92499 740 aaKnown RBP12.7□□□□□ -0.38
FANCA-231ENST00000568626 SPATA17Q96L03 361 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 PANX2Q96RD6 677 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 LPIN3Q9BQK8 851 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 ZSWIM1Q9BR11 485 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 RHOBTB2Q9BYZ6 727 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 UBXN6Q9BZV1 441 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 CRISPLD1Q9H336 500 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 ACP6Q9NPH0 428 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 ASB3Q9Y575 518 aa12.7□□□□□ -0.38
FANCA-231ENST00000568626 F8VP50 259 aa12.69□□□□□ -0.38
FANCA-231ENST00000568626 CLDN5O00501 218 aa12.69□□□□□ -0.38
FANCA-231ENST00000568626 XYLBO75191 536 aa12.69□□□□□ -0.38
FANCA-231ENST00000568626 PAPLNO95428 1278 aa12.69□□□□□ -0.38
FANCA-231ENST00000568626 SEC24AO95486 1093 aa12.69□□□□□ -0.38
FANCA-231ENST00000568626 CDH5P33151 784 aaPredicted RBP12.69□□□□□ -0.38
FANCA-231ENST00000568626 PLA2G4AP47712 749 aa12.69□□□□□ -0.38
FANCA-231ENST00000568626 EPHB3P54753 998 aa12.69□□□□□ -0.38
FANCA-231ENST00000568626 ADKP55263 362 aaKnown RBP12.69□□□□□ -0.38
FANCA-231ENST00000568626 SNX16P57768 344 aa12.69□□□□□ -0.38
FANCA-231ENST00000568626 CTC1Q2NKJ3 1217 aa12.69□□□□□ -0.38
FANCA-231ENST00000568626 TAF3Q5VWG9 929 aa12.69□□□□□ -0.38
FANCA-231ENST00000568626 HGSNATQ68CP4 663 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms