RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 NDRG2Q9UN36 371 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 DOLKQ9UPQ8 538 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 MTF2Q9Y483 593 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 YIPF1Q9Y548 306 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 PCDHB9Q9Y5E1 797 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 PCDHB5Q9Y5E4 795 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 PCDHGA2Q9Y5H1 932 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 STYXL1Q9Y6J8 313 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 R4GN57 208 aa5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 KIF26AQ9ULI4 1882 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 ZFHX2Q9C0A1 2572 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-213ENST00000568358 NUP210Q8TEM1 1887 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 ANO9A1A5B4 782 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 MTMR11A4FU01 709 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 ZNF233A6NK53 670 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 ANKRD63C9JTQ0 380 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 TNFRSF10BO14763 440 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 PPP1R12AO14974 1030 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 CHADO15335 359 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 MEFVO15553 781 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 STX6O43752 255 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 EXTL3O43909 919 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 LRRN2O75325 713 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 TNNC2P02585 160 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 NFICP08651 508 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 TMEM191BP0C7N4 346 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 GJA1P17302 382 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 GARTP22102 1010 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 DDX6P26196 483 aaKnown RBP eCLIP5.01□□□□□ -1.614e-7■■■□□ 15.1
HERPUD1-213ENST00000568358 GABRR2P28476 465 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 PCSK1P29120 753 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 AVPR1AP37288 418 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 CCR2P41597 374 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 CXCL12P48061 93 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 LHX1P48742 406 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 CCR3P51677 355 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 EPHA5P54756 1037 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 RPL10AP62906 217 aaKnown RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 RBP5P82980 135 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 GRIN1Q05586 938 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 BFSP1Q12934 665 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 SLC39A14Q15043 492 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 NFE2Q16621 373 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 ARHGAP29Q52LW3 1261 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 SWT1Q5T5J6 900 aaKnown RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 WSCD1Q658N2 575 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 VITQ6UXI7 678 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 HS2ST1Q7LGA3 356 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 RALGPS2Q86X27 583 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 ARID3BQ8IVW6 561 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 KIAA2013Q8IYS2 634 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 TMEM86AQ8N2M4 240 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 CELF5Q8N6W0 485 aaKnown RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 PDILTQ8N807 584 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 FSIP1Q8NA03 581 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 IQUBQ8NA54 791 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 TSEN2Q8NCE0 465 aaKnown RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 SHKBP1Q8TBC3 707 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 ANKRD36BP1Q96IX9 119 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 ZSWIM3Q96MP5 696 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 CLIC6Q96NY7 704 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 ZCWPW1Q9H0M4 648 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 TASP1Q9H6P5 420 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 TRPV4Q9HBA0 871 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 KIAA1586Q9HCI6 787 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 OLFML3Q9NRN5 406 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 OBP2AQ9NY56 170 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 ABI2Q9NYB9 513 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 RBAKQ9NYW8 714 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 DLGAP2Q9P1A6 1054 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 MAP10Q9P2G4 905 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 UXTQ9UBK9 157 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 FBXO2Q9UK22 296 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 GMEB2Q9UKD1 530 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 ITGA11Q9UKX5 1188 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 G3BP2Q9UN86 482 aaKnown RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 MAGED2Q9UNF1 606 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 AGAP1Q9UPQ3 857 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 PIAS3Q9Y6X2 628 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 PATJQ8NI35 1801 aa5.01□□□□□ -1.61
HERPUD1-213ENST00000568358 SPAG17Q6Q759 2223 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 MYMKA6NI61 221 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 SOBPA7XYQ1 873 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 NRG2O14511 850 aaPredicted RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 PPEF2O14830 753 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 SPTLC2O15270 562 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 FAM189A1O60320 539 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 ATG13O75143 517 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 PPP6R2O75170 966 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 SOAT2O75908 522 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 PRPF6O94906 941 aaKnown RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 ITGB3P05106 788 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 CSH1P0DML2 217 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 CSH2P0DML3 217 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 HAPLN1P10915 354 aaPredicted RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 FCARP24071 287 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 CCNE1P24864 410 aa5□□□□□ -1.61
HERPUD1-213ENST00000568358 TARSP26639 723 aaKnown RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 POLR2BP30876 1174 aaKnown RBP5□□□□□ -1.61
HERPUD1-213ENST00000568358 ST13P50502 369 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms