RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 RAP1GAPP47736 663 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 TAF6P49848 677 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 PEX5P50542 639 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 NDST1P52848 882 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 SNX16P57768 344 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 DNAJC24Q6P3W2 148 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 DPH6Q7L8W6 267 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 TMCO2Q7Z6W1 182 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-221ENST00000567935 EIF1ADQ8N9N8 165 aaKnown RBP15.44■□□□□ 0.06
COMMD4-221ENST00000567935 C1orf131Q8NDD1 294 aaKnown RBP15.44■□□□□ 0.06
COMMD4-221ENST00000567935 MAIP1Q8WWC4 291 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.44■□□□□ 0.06
COMMD4-221ENST00000567935 RUNDC3BQ96NL0 473 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 PNKPQ96T60 521 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 APOL6Q9BWW8 343 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 ERVK-5Q9HDB9 667 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 TRMT13Q9NUP7 481 aaKnown RBP15.44■□□□□ 0.06
COMMD4-221ENST00000567935 FAM105AQ9NUU6 356 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 STIM2Q9P246 746 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 TUBGCP4Q9UGJ1 667 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 MUTYHQ9UIF7 546 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.44■□□□□ 0.06
COMMD4-221ENST00000567935 NOD1Q9Y239 953 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 GIT1Q9Y2X7 761 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 HES2Q9Y543 173 aa15.44■□□□□ 0.06
COMMD4-221ENST00000567935 SCN1AP35498 2009 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 O00370 1275 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 KRIT1O00522 736 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 PSTPIP1O43586 416 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 ZRANB2O95218 330 aaKnown RBP eCLIP15.43■□□□□ 0.06
COMMD4-221ENST00000567935 CFHP08603 1231 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 ITGA4P13612 1032 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 AKAP5P24588 427 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 THPOP40225 353 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 GUCY2FP51841 1108 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 CDH8P55286 799 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 VSNL1P62760 191 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 PAK2Q13177 524 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 PUS10Q3MIT2 529 aaKnown RBP15.43■□□□□ 0.06
COMMD4-221ENST00000567935 LCLAT1Q6UWP7 414 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 MAATS1Q7Z4T9 603 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 MRPL10Q7Z7H8 261 aaKnown RBP15.43■□□□□ 0.06
COMMD4-221ENST00000567935 CCDC26Q8TAB7 109 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 IPO4Q8TEX9 1081 aaKnown RBP15.43■□□□□ 0.06
COMMD4-221ENST00000567935 FNIP1Q8TF40 1166 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 HEXIM2Q96MH2 286 aaKnown RBP15.43■□□□□ 0.06
COMMD4-221ENST00000567935 EPC1Q9H2F5 836 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 UBN1Q9NPG3 1134 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.43■□□□□ 0.06
COMMD4-221ENST00000567935 SNX9Q9Y5X1 595 aa15.43■□□□□ 0.06
COMMD4-221ENST00000567935 SPTBN4Q9H254 2564 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 TCRBV5S1A1TA0A578 114 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 MICAL2O94851 1124 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 FGGP02679 453 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 NFX1Q12986 1120 aaKnown RBP15.42■□□□□ 0.06
COMMD4-221ENST00000567935 PIGHQ14442 188 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-221ENST00000567935 ZNF268Q14587 947 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-221ENST00000567935 LONRF2Q1L5Z9 754 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 LRRC38Q5VT99 294 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 ARHGAP17Q68EM7 881 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 DENND1BQ6P3S1 775 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 LIMS2Q7Z4I7 341 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 RHOT1Q8IXI2 618 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 IFT20Q8IY31 132 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 TOP6BLQ8N6T0 577 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 NIPA2Q8N8Q9 360 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 ALG3Q92685 438 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 C18orf25Q96B23 403 aaPredicted RBP15.42■□□□□ 0.06
COMMD4-221ENST00000567935 PGBD4Q96DM1 585 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 C18orf8Q96DM3 657 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 PPP1R10Q96QC0 940 aaKnown RBP15.42■□□□□ 0.06
COMMD4-221ENST00000567935 LRRC1Q9BTT6 524 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 ALG13Q9NP73 1137 aaKnown RBP15.42■□□□□ 0.06
COMMD4-221ENST00000567935 EHD2Q9NZN4 543 aa15.42■□□□□ 0.06
COMMD4-221ENST00000567935 TMEM191CA6NGB0 347 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 KPNA7A9QM74 516 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 CTSHP09668 335 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 RPL9P32969 192 aaKnown RBP15.41■□□□□ 0.06
COMMD4-221ENST00000567935 CETN2P41208 172 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 GABRB2P47870 512 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 ACAP1Q15027 740 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 TRIM71Q2Q1W2 868 aaKnown RBP15.41■□□□□ 0.06
COMMD4-221ENST00000567935 GLRA4Q5JXX5 417 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 PPP1R15BQ5SWA1 713 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 BEND6Q5SZJ8 279 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-221ENST00000567935 DCAF12L1Q5VU92 463 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 DCUN1D2Q6PH85 259 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 ERMP1Q7Z2K6 904 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 ADHFE1Q8IWW8 467 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 WDTC1Q8N5D0 677 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 STK32AQ8WU08 396 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 WNT8BQ93098 351 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 TWNKQ96RR1 684 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 KRT12Q99456 494 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 SMARCAL1Q9NZC9 954 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 PRKAG3Q9UGI9 489 aa15.41■□□□□ 0.06
COMMD4-221ENST00000567935 ZFHX2Q9C0A1 2572 aaPredicted RBP15.41■□□□□ 0.06
COMMD4-221ENST00000567935 MYO15AQ9UKN7 3530 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 SIGLEC16A6NMB1 481 aa15.4■□□□□ 0.06
COMMD4-221ENST00000567935 M0QYV0 167 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms