RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 Q3C1V9 767 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 LDHDQ86WU2 507 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 MAGEC3Q8TD91 643 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 FRMD8Q9BZ67 464 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 NDEL1Q9GZM8 345 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 CSADQ9Y600 493 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 DCCP43146 1447 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 RIPK1Q13546 671 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 PTK2BQ14289 1009 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 CCDC60Q8IWA6 550 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 ELMO2Q96JJ3 720 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 PNMA5Q96PV4 448 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZNF302Q9NR11 478 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 PROCP04070 461 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 NUDT17P0C025 328 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZNF23P17027 643 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 UGP2Q16851 508 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 C16orf86Q6ZW13 317 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 EXD1Q8NHP7 514 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 ACTL9Q8TC94 416 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 RMND5BQ96G75 393 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 EXOSC4Q9NPD3 245 aaKnown RBP12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 OVOS2A0A0J9YW53 1432 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 OVOS2Q6IE36 1432 aa12.88□□□□□ -0.35
CSPG4P13-202ENST00000567704 RAD17O75943 681 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 ASNSP08243 561 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 PSMA4P25789 261 aaKnown RBP12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 TMEM143Q96AN5 459 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 NUDT12Q9BQG2 462 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 OLA1Q9NTK5 396 aaKnown RBP12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 COMMD3-BMI1R4GMX3 469 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 DPPA5A6NC42 116 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 DNALI1O14645 258 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 NFKBIAP25963 317 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 MMP13P45452 471 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 MCL1Q07820 350 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 LACTB2Q53H82 288 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 CNKSR1Q969H4 720 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 DAPK2Q9UIK4 370 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 SUGT1Q9Y2Z0 365 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 SAC3D1A6NKF1 404 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 C3orf70A6NLC5 250 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 MSH4O15457 936 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 HNRNPRO43390 633 aaKnown RBP12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 NDUFB10O96000 172 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 C21orf59P57076 290 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 SLC35C1Q96A29 364 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 LRMDAQ9H2I8 198 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 DCDC2Q9UHG0 476 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 PCDHA3Q9Y5H8 950 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 MYO1GB0I1T2 1018 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 POLRMTO00411 1230 aaKnown RBP12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 COG2Q14746 738 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 RBBP7Q16576 425 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 SPOCD1Q6ZMY3 1216 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 METTL23Q86XA0 190 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 KYQ8NBH2 561 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 GLIS3Q8NEA6 775 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 NMRK1Q9NWW6 199 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 RPS6KL1Q9Y6S9 549 aa12.87□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZNF839A8K0R7 811 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 ELK3P41970 407 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 MRPL28Q13084 256 aaKnown RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 GRM1Q13255 1194 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 LBRQ14739 615 aaKnown RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 AASDHQ4L235 1098 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 CWF19L1Q69YN2 538 aaKnown RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 CATSPER4Q7RTX7 472 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 NSUN6Q8TEA1 469 aaKnown RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 USP33Q8TEY7 942 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 SCFD2Q8WU76 684 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 BAP1Q92560 729 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 IFT43Q96FT9 208 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 SRPK1Q96SB4 655 aaKnown RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 FAM49AQ9H0Q0 323 aaPredicted RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 TMEM165Q9HC07 324 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 MRGBPQ9NV56 204 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 DCDC2CA8MYV0 355 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 PEX1O43933 1283 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 DGAT1O75907 488 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 SGSM1Q2NKQ1 1148 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 TMC5Q6UXY8 1006 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZCCHC23Q6ZST2 131 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZSWIM2Q8NEG5 633 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 OR6Y1Q8NGX8 325 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 SNX19Q92543 992 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 TIPINQ9BVW5 301 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 ZNF408Q9H9D4 720 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 RNF146Q9NTX7 359 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 BLOC1S4Q9NUP1 217 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 SCN3BQ9NY72 215 aa12.86□□□□□ -0.35
CSPG4P13-202ENST00000567704 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms