RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 RECQLP46063 649 aaPredicted RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 RXRGP48443 463 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SERPINB8P50452 374 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 STAT5BP51692 787 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 XIAPP98170 497 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SLC34A1Q06495 639 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 GRB10Q13322 594 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SEC23AQ15436 765 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SPOUT1Q5T280 376 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 MAP1SQ66K74 1059 aaPredicted RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SNRNP48Q6IEG0 339 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 USP49Q70CQ1 688 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 LRRC43Q8N309 656 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 RYBPQ8N488 228 aaPredicted RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 VPS37AQ8NEZ2 397 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 TRPC4APQ8TEL6 797 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SEPT1Q8WYJ6 367 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 UBE2OQ9C0C9 1292 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 KLHL4Q9C0H6 718 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SMARCAD1Q9H4L7 1026 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 CYP3A43Q9HB55 503 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 MAD2L2Q9UI95 211 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 LRFN2Q9ULH4 789 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 CAPN6Q9Y6Q1 641 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 MRC1P22897 1456 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 H3BQF6 201 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 PIK3CDO00329 1044 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 CXCL11O14625 94 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 TRDMT1O14717 391 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 AKAP10O43572 662 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 CST8O60676 142 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 HLA-DRAP01903 254 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ALBP02768 609 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ABHD2P08910 425 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 BRD2P25440 801 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 RGS4P49798 205 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 PEX5P50542 639 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 KCNK10P57789 538 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 POU5F1BQ06416 359 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 EPS8Q12929 822 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ITGA9Q13797 1035 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 LLGL1Q15334 1064 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 RIC1Q4ADV7 1423 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 UGT3A1Q6NUS8 523 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 TMC3Q7Z5M5 1100 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 GPR141Q7Z602 305 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 PLD3Q8IV08 490 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 C4orf33Q8N1A6 199 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 PTPRN2Q92932 1015 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ARL8AQ96BM9 186 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 CDCA5Q96FF9 252 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 APOL6Q9BWW8 343 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 TEX13BQ9BXU2 312 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 CCDC90BQ9GZT6 254 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 PAPOLBQ9NRJ5 636 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 FAM217BQ9NTX9 383 aaPredicted RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ARHGEF38Q9NXL2 777 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ARHGAP20Q9P2F6 1191 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 DDX20Q9UHI6 824 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 DMGDHQ9UI17 866 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 STARD13Q9Y3M8 1113 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 LRRC37A3O60309 1634 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 THSD7AQ9UPZ6 1657 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 RGPD8O14715 1765 aaPredicted RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SNTNA6NMZ2 147 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 CLASP2O75122 1294 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 WFS1O76024 890 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SLC2A3P11169 496 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 KCNA2P16389 499 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 PSMC3P17980 439 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SREBF1P36956 1147 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 GCNT1Q02742 428 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 CSTF3Q12996 717 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SLC12A1Q13621 1099 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 USP10Q14694 798 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 RCN1Q15293 331 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 CCDC153Q494R4 210 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 PREPLQ4J6C6 727 aaPredicted RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF394Q53GI3 561 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 SLC45A4Q5BKX6 768 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 AGAP9Q5VTM2 703 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 BNC2Q6ZN30 1099 aaPredicted RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 C15orf52Q6ZUT6 534 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 NIPA1Q7RTP0 329 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ZDHHC17Q8IUH5 632 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 BBS7Q8IWZ6 715 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 DACH2Q96NX9 599 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ASB2Q96Q27 587 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 CDC42EP4Q9H3Q1 356 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 COG4Q9H9E3 785 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ELP3Q9H9T3 547 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 JMJD4Q9H9V9 463 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 HEY2Q9UBP5 337 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ENOPH1Q9UHY7 261 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 RABGEF1Q9UJ41 708 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ZNF229Q9UJW7 825 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 ATP11BQ9Y2G3 1177 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 AAR2Q9Y312 384 aaKnown RBP4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 RAD54BQ9Y620 910 aa4.52□□□□□ -1.69
LPCAT2-208ENST00000566915 C15orf38-AP3S2A0A0A6YYH1 394 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms