RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 SLC8A2Q9UPR5 921 aa6.85□□□□□ -1.31
TCF4-228ENST00000565393 C2orf78A6NCI8 922 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 OTOL1A6NHN0 477 aaPredicted RBP6.84□□□□□ -1.31
TCF4-228ENST00000565393 CLDN5O00501 218 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 TRIM66O15016 1216 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 LILRB5O75023 590 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 TACC1O75410 805 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 KIF20AO95235 890 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 PFKFB1P16118 471 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 CMA1P23946 247 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 PXNP49023 591 aaPredicted RBP6.84□□□□□ -1.31
TCF4-228ENST00000565393 CASP4P49662 377 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 PDE6CP51160 858 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 AP3M2P53677 418 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 KRT85P78386 507 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 FAM160A1Q05DH4 1040 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 EHHADHQ08426 723 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 DMWDQ09019 674 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 IFRD2Q12894 506 aaPredicted RBP6.84□□□□□ -1.31
TCF4-228ENST00000565393 STK4Q13043 487 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 SRSF5Q13243 272 aaKnown RBP6.84□□□□□ -1.31
TCF4-228ENST00000565393 GAS6Q14393 721 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 SGSM1Q2NKQ1 1148 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 ZNF667Q5HYK9 610 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 CEP135Q66GS9 1140 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 DENND5BQ6ZUT9 1274 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 DGLUCYQ7Z3D6 616 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 LIMS2Q7Z4I7 341 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 LONP2Q86WA8 852 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 CPA6Q8N4T0 437 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 SH3RF2Q8TEC5 729 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 OSCP1Q8WVF1 389 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 KBTBD7Q8WVZ9 684 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 NELL1Q92832 810 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 MYLPFQ96A32 169 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 ELMO3Q96BJ8 720 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 RMDN1Q96DB5 314 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 SPATA17Q96L03 361 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 C8orf48Q96LL4 319 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 SLC22A12Q96S37 553 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 P2RY13Q9BPV8 354 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 EPC1Q9H2F5 836 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 FBRSL1Q9HCM7 1045 aaKnown RBP6.84□□□□□ -1.31
TCF4-228ENST00000565393 HPS4Q9NQG7 708 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 PRMT8Q9NR22 394 aaPredicted RBP6.84□□□□□ -1.31
TCF4-228ENST00000565393 USP25Q9UHP3 1055 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 USP18Q9UMW8 372 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 FRMD4BQ9Y2L6 1034 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 WNT6Q9Y6F9 365 aa6.84□□□□□ -1.31
TCF4-228ENST00000565393 C2orf16Q68DN1 1984 aa6.84□□□□□ -1.32
TCF4-228ENST00000565393 NCOR1O75376 2440 aa6.84□□□□□ -1.32
TCF4-228ENST00000565393 DENND4AQ7Z401 1863 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 KMT2EQ8IZD2 1858 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 UBE4BO95155 1302 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 ZNF840PA6NDX5 716 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 LRRIQ3A6PVS8 624 aaPredicted RBP6.83□□□□□ -1.32
TCF4-228ENST00000565393 F8VP50 259 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 PDXKO00764 312 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 TRDMT1O14717 391 aaKnown RBP6.83□□□□□ -1.32
TCF4-228ENST00000565393 AXIN1O15169 862 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 ACTN4O43707 911 aaKnown RBP6.83□□□□□ -1.32
TCF4-228ENST00000565393 CALUO43852 315 aaPredicted RBP6.83□□□□□ -1.32
TCF4-228ENST00000565393 EGFP01133 1207 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 C4BPAP04003 597 aaKnown RBP6.83□□□□□ -1.32
TCF4-228ENST00000565393 RPN1P04843 607 aaKnown RBP6.83□□□□□ -1.32
TCF4-228ENST00000565393 P4HA1P13674 534 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 SDHBP21912 280 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 YWHAQP27348 245 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 CNR2P34972 360 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 GJA4P35212 333 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 SYKP43405 635 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 PPP3CCP48454 512 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 USP46P62068 366 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 DLG4P78352 724 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 SPEM2Q0P670 501 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 TAF10Q12962 218 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 ZNF268Q14587 947 aaPredicted RBP6.83□□□□□ -1.32
TCF4-228ENST00000565393 PUM1Q14671 1186 aaKnown RBP eCLIP6.83□□□□□ -1.32
TCF4-228ENST00000565393 MTF1Q14872 753 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 BMT2Q1RMZ1 405 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 RSPO4Q2I0M5 234 aaPredicted RBP6.83□□□□□ -1.32
TCF4-228ENST00000565393 ZNF699Q32M78 642 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 TMEM196Q5HYL7 178 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 LAIR1Q6GTX8 287 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 FSTL4Q6MZW2 842 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 ERMP1Q7Z2K6 904 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.83□□□□□ -1.32
TCF4-228ENST00000565393 ACOT1Q86TX2 421 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 C12orf56Q8IXR9 622 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 ADGRG2Q8IZP9 1017 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 NUP93Q8N1F7 819 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 PARD3BQ8TEW8 1205 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 CD101Q93033 1021 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 ATP2A3Q93084 1043 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 CHFRQ96EP1 664 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 CHAMP1Q96JM3 812 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 TNIP3Q96KP6 325 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 CEP295NLQ96MC4 621 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 SLITRK1Q96PX8 696 aa6.83□□□□□ -1.32
TCF4-228ENST00000565393 KCNK16Q96T55 309 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms