RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 SDHAF4Q5VUM1 108 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 SPECC1LQ69YQ0 1117 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 VSTM1Q6UX27 236 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 TMC5Q6UXY8 1006 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 TTC30AQ86WT1 665 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 GPIHBP1Q8IV16 184 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 ZNF606Q8WXB4 792 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 SPAG5Q96R06 1193 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 SMOQ99835 787 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 UBE2ZQ9H832 354 aaPredicted RBP13.23□□□□□ -0.29
KARS-204ENST00000564578 PRDM6Q9NQX0 595 aa13.23□□□□□ -0.29
KARS-204ENST00000564578 F8VP50 259 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 H3BQ06 376 aaPredicted RBP13.22□□□□□ -0.29
KARS-204ENST00000564578 GFPT2O94808 682 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 HOXB8P17481 243 aaPredicted RBP13.22□□□□□ -0.29
KARS-204ENST00000564578 ADORA2BP29275 332 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 GNA15P30679 374 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 ZNF75DP51815 510 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 CNGA2Q16280 664 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 PPM1LQ5SGD2 360 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 E4F1Q66K89 784 aaPredicted RBP13.22□□□□□ -0.29
KARS-204ENST00000564578 CACNA2D4Q7Z3S7 1137 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 SMRP1Q8NCR6 262 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 STKLD1Q8NE28 680 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 CMASQ8NFW8 434 aaPredicted RBP13.22□□□□□ -0.29
KARS-204ENST00000564578 DDX1Q92499 740 aaKnown RBP13.22□□□□□ -0.29
KARS-204ENST00000564578 HLA-CQ95604 372 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 NUP58Q9BVL2 599 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 APOL5Q9BWW9 433 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 PRKD2Q9BZL6 878 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 SFXN1Q9H9B4 322 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 KRT82Q9NSB4 513 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 DZANK1Q9NVP4 752 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 TSPAN16Q9UKR8 245 aa13.22□□□□□ -0.29
KARS-204ENST00000564578 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.22□□□□□ -0.29
KARS-204ENST00000564578 A0A1W2PQJ5 194 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 LRRC53A6NM62 1247 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 CCL16O15467 120 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 HNRNPA1P09651 372 aaKnown RBP eCLIP13.21□□□□□ -0.29
KARS-204ENST00000564578 CYP11B1P15538 503 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 KCNA5P22460 613 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 SSTR3P32745 418 aaPredicted RBP13.21□□□□□ -0.29
KARS-204ENST00000564578 STAT1P42224 750 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 PTK2Q05397 1052 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 LCLAT1Q6UWP7 414 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 CLEC20AQ6ZU45 233 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 IRF2BP2Q7Z5L9 587 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 ANKRD52Q8NB46 1076 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 EPS8L1Q8TE68 723 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 SMARCD1Q96GM5 515 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 MRFAP1L1Q96HT8 127 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 MED10Q9BTT4 135 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 DUSP16Q9BY84 665 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 CAPN11Q9UMQ6 739 aa13.21□□□□□ -0.29
KARS-204ENST00000564578 TULP2O00295 520 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 AP1G2O75843 785 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 SRGAP2BP0DMP2 458 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 NPR3P17342 541 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 GRIK1P39086 918 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 ALDH1A3P47895 512 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 MAP3K7CLP57077 242 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 CLUL1Q15846 466 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 RARS2Q5T160 578 aaKnown RBP13.21□□□□□ -0.3
KARS-204ENST00000564578 GPR149Q86SP6 731 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 NOP9Q86U38 636 aaKnown RBP13.21□□□□□ -0.3
KARS-204ENST00000564578 SCN4BQ8IWT1 228 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 GIPC2Q8TF65 315 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 CPLX3Q8WVH0 158 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 C8orf48Q96LL4 319 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 DNAI2Q9GZS0 605 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 ADAM7Q9H2U9 754 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 HCFC1R1Q9NWW0 138 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 NOCTQ9UK39 431 aaKnown RBP13.21□□□□□ -0.3
KARS-204ENST00000564578 MYO6Q9UM54 1294 aa13.21□□□□□ -0.3
KARS-204ENST00000564578 HHLA1C9JL84 531 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 TNFRSF10BO14763 440 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 THAP12O43422 761 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 MICAL2O94851 1124 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 FAM200BP0CF97 657 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 HMGA1P17096 107 aaKnown RBP13.2□□□□□ -0.3
KARS-204ENST00000564578 CASP14P31944 242 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 TFF2Q03403 129 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 TBX2Q13207 712 aaPredicted RBP13.2□□□□□ -0.3
KARS-204ENST00000564578 MTMR3Q13615 1198 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 GOLGA7BQ2TAP0 167 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 DNAJB7Q7Z6W7 309 aaPredicted RBP13.2□□□□□ -0.3
KARS-204ENST00000564578 UBA3Q8TBC4 463 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 PSMG2Q969U7 264 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 SPATA17Q96L03 361 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 LRRC3Q9BY71 257 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 DMAP1Q9NPF5 467 aaPredicted RBP13.2□□□□□ -0.3
KARS-204ENST00000564578 AIPL1Q9NZN9 384 aa13.2□□□□□ -0.3
KARS-204ENST00000564578 DNMT3BQ9UBC3 853 aaKnown RBP13.2□□□□□ -0.3
KARS-204ENST00000564578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.2□□□□□ -0.31e-9■□□□□ 10.5
KARS-204ENST00000564578 MUC3AQ02505 3323 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 NRG2O14511 850 aaPredicted RBP13.19□□□□□ -0.3
KARS-204ENST00000564578 GABBR2O75899 941 aa13.19□□□□□ -0.3
KARS-204ENST00000564578 LRG1P02750 347 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms