RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 TNK2Q07912 1038 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 GRSF1Q12849 480 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPG7-210ENST00000564409 TRPC3Q13507 836 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 CUL4BQ13620 913 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 WDR72Q3MJ13 1102 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 FOXD4L6Q3SYB3 417 aaPredicted RBP16.03■□□□□ 0.16
SPG7-210ENST00000564409 SCARA3Q6AZY7 606 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 TXNDC11Q6PKC3 985 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 TSSK4Q6SA08 328 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 FOXD4L3Q6VB84 417 aaPredicted RBP16.03■□□□□ 0.16
SPG7-210ENST00000564409 SCN4BQ8IWT1 228 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 KIAA2013Q8IYS2 634 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 SYAP1Q96A49 352 aaPredicted RBP16.03■□□□□ 0.16
SPG7-210ENST00000564409 CCDC127Q96BQ5 260 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 FAM84AQ96KN4 292 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 BLZF1Q9H2G9 400 aa16.03■□□□□ 0.16
SPG7-210ENST00000564409 HELZP42694 1942 aaKnown RBP16.03■□□□□ 0.16
SPG7-210ENST00000564409 TRDMT1O14717 391 aaKnown RBP16.02■□□□□ 0.16
SPG7-210ENST00000564409 EXOC3O60645 756 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 ATG13O75143 517 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 ATP2C2O75185 946 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 CST3P01034 146 aaPredicted RBP16.02■□□□□ 0.16
SPG7-210ENST00000564409 CLDN10P78369 228 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 GAS6Q14393 721 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 PON2Q15165 354 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 TMEM196Q5HYL7 178 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 SDHAF4Q5VUM1 108 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 DENND5BQ6ZUT9 1274 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 SLC9A9Q8IVB4 645 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 MYLPFQ96A32 169 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 C8orf48Q96LL4 319 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 SMG9Q9H0W8 520 aaKnown RBP16.02■□□□□ 0.16
SPG7-210ENST00000564409 VRTNQ9H8Y1 702 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 CRTAC1Q9NQ79 661 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 EXOC1Q9NV70 894 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 CCL26Q9Y258 94 aa16.02■□□□□ 0.16
SPG7-210ENST00000564409 RALGAPA1Q6GYQ0 2036 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 ACTN4O43707 911 aaKnown RBP16.01■□□□□ 0.15
SPG7-210ENST00000564409 PHACTR2O75167 634 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 TADA3O75528 432 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 KIF20AO95235 890 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 CKMP06732 381 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 PDGFRBP09619 1106 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 BDNFP23560 247 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 GRIK1P39086 918 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 PSMC1P62191 440 aaKnown RBP16.01■□□□□ 0.15
SPG7-210ENST00000564409 NOP14P78316 857 aaKnown RBP16.01■□□□□ 0.15
SPG7-210ENST00000564409 SATB1Q01826 763 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 CYP27A1Q02318 531 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 NR1H3Q13133 447 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 PUM1Q14671 1186 aaKnown RBP eCLIP16.01■□□□□ 0.15
SPG7-210ENST00000564409 KCNB1Q14721 858 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 LAIR1Q6GTX8 287 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 CPA6Q8N4T0 437 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 OR6B3Q8NGW1 331 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 CCDC26Q8TAB7 109 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 ATP2A3Q93084 1043 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 PCED1BQ96HM7 432 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 TTLL2Q9BWV7 592 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 ELOVL4Q9GZR5 314 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 XYLT2Q9H1B5 865 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 HPS4Q9NQG7 708 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 TRPM5Q9NZQ8 1165 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 GCNT4Q9P109 453 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 SERTAD1Q9UHV2 236 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 GMEB2Q9UKD1 530 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 ATP6V1DQ9Y5K8 247 aa16.01■□□□□ 0.15
SPG7-210ENST00000564409 CCDC163A0A0D9SF12 145 aa16■□□□□ 0.15
SPG7-210ENST00000564409 PDXKO00764 312 aa16■□□□□ 0.15
SPG7-210ENST00000564409 HCRTO43612 131 aa16■□□□□ 0.15
SPG7-210ENST00000564409 KLRC4O43908 158 aa16■□□□□ 0.15
SPG7-210ENST00000564409 LRP3O75074 770 aa16■□□□□ 0.15
SPG7-210ENST00000564409 PTPN1P18031 435 aaKnown RBP16■□□□□ 0.15
SPG7-210ENST00000564409 HDCP19113 662 aa16■□□□□ 0.15
SPG7-210ENST00000564409 DRD1P21728 446 aa16■□□□□ 0.15
SPG7-210ENST00000564409 CASP1P29466 404 aa16■□□□□ 0.15
SPG7-210ENST00000564409 KRT85P78386 507 aa16■□□□□ 0.15
SPG7-210ENST00000564409 USP4Q13107 963 aa16■□□□□ 0.15
SPG7-210ENST00000564409 PKP1Q13835 747 aa16■□□□□ 0.15
SPG7-210ENST00000564409 MTF1Q14872 753 aa16■□□□□ 0.15
SPG7-210ENST00000564409 ZNF77Q15935 545 aa16■□□□□ 0.15
SPG7-210ENST00000564409 FBXO43Q4G163 708 aa16■□□□□ 0.15
SPG7-210ENST00000564409 LONP2Q86WA8 852 aa16■□□□□ 0.15
SPG7-210ENST00000564409 DCLK2Q8N568 766 aa16■□□□□ 0.15
SPG7-210ENST00000564409 TTC8Q8TAM2 541 aa16■□□□□ 0.15
SPG7-210ENST00000564409 PARD3BQ8TEW8 1205 aa16■□□□□ 0.15
SPG7-210ENST00000564409 OSCP1Q8WVF1 389 aa16■□□□□ 0.15
SPG7-210ENST00000564409 ZNF516Q92618 1163 aa16■□□□□ 0.15
SPG7-210ENST00000564409 CCDC47Q96A33 483 aaKnown RBP16■□□□□ 0.15
SPG7-210ENST00000564409 SPATA32Q96LK8 384 aa16■□□□□ 0.15
SPG7-210ENST00000564409 MRPL45Q9BRJ2 306 aaKnown RBP16■□□□□ 0.15
SPG7-210ENST00000564409 EBF3Q9H4W6 596 aa16■□□□□ 0.15
SPG7-210ENST00000564409 TRPC7Q9HCX4 862 aa16■□□□□ 0.15
SPG7-210ENST00000564409 RBM12Q9NTZ6 932 aaKnown RBP16■□□□□ 0.15
SPG7-210ENST00000564409 DMAC2Q9NW81 257 aa16■□□□□ 0.15
SPG7-210ENST00000564409 DUS2Q9NX74 493 aaKnown RBP16■□□□□ 0.15
SPG7-210ENST00000564409 ARHGAP26Q9UNA1 814 aa16■□□□□ 0.15
SPG7-210ENST00000564409 SPAG17Q6Q759 2223 aa16■□□□□ 0.15
SPG7-210ENST00000564409 CEP250Q9BV73 2442 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms