RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 PRMT8Q9NR22 394 aaPredicted RBP18.88■□□□□ 0.61
NME3-205ENST00000563854 TDP1Q9NUW8 608 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 CFAP54Q96N23 3096 aa18.88■□□□□ 0.61
NME3-205ENST00000563854 TRAV19A0A0A6YYK7 116 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 A8MXQ7 604 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 NR3C1P04150 777 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 CHRNB1P11230 501 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 DMDP11532 3685 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 RAP1GAPP47736 663 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 CC2D1AQ6P1N0 951 aaPredicted RBP18.87■□□□□ 0.61
NME3-205ENST00000563854 C1orf228Q6PIY5 440 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 MYCBPAPQ8TBZ2 947 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 SCAND2PQ9GZW5 306 aaPredicted RBP18.87■□□□□ 0.61
NME3-205ENST00000563854 EBF3Q9H4W6 596 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 SMYD3Q9H7B4 428 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 ZSCAN32Q9NX65 697 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 NME7Q9Y5B8 376 aa18.87■□□□□ 0.61
NME3-205ENST00000563854 DENND4CQ5VZ89 1909 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 KIF26AQ9ULI4 1882 aaPredicted RBP18.86■□□□□ 0.61
NME3-205ENST00000563854 TACC1O75410 805 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 MYL1P05976 194 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 ATICP31939 592 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 CCR3P51677 355 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 MLLT6P55198 1093 aaPredicted RBP18.86■□□□□ 0.61
NME3-205ENST00000563854 IFRD2Q12894 506 aaPredicted RBP18.86■□□□□ 0.61
NME3-205ENST00000563854 PPP2R5DQ14738 602 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 VSTM1Q6UX27 236 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 Q6ZS52 159 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 ARL14EPQ8N8R7 260 aaPredicted RBP18.86■□□□□ 0.61
NME3-205ENST00000563854 RIN3Q8TB24 985 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 PARD3BQ8TEW8 1205 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 MYRFLQ96LU7 910 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 CYP2S1Q96SQ9 504 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 XYLT2Q9H1B5 865 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 KCTD10Q9H3F6 313 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 GOLPH3LQ9H4A5 285 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 MAPK8IP1Q9UQF2 711 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 PCDHGA2Q9Y5H1 932 aa18.86■□□□□ 0.61
NME3-205ENST00000563854 ZNF638Q14966 1978 aaKnown RBP18.86■□□□□ 0.61
NME3-205ENST00000563854 C2orf78A6NCI8 922 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 F8VP50 259 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 TRIM66O15016 1216 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 CALUO43852 315 aaPredicted RBP18.85■□□□□ 0.61
NME3-205ENST00000563854 USP17L7P0C7H9 530 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 ARSAP15289 507 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 PTPN1P18031 435 aaKnown RBP18.85■□□□□ 0.61
NME3-205ENST00000563854 CDH8P55286 799 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 DLG4P78352 724 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 SATB1Q01826 763 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 RUNX3Q13761 415 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 NCOA4Q13772 614 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 KCNB1Q14721 858 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 ZNF667Q5HYK9 610 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 SLC22A12Q96S37 553 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 IER2Q9BTL4 223 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 ZNF518BQ9C0D4 1074 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 HPS4Q9NQG7 708 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 DMAC2Q9NW81 257 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 FRMD4BQ9Y2L6 1034 aa18.85■□□□□ 0.61
NME3-205ENST00000563854 PTPRZ1P23471 2315 aaPredicted RBP18.85■□□□□ 0.61
NME3-205ENST00000563854 FANCMQ8IYD8 2048 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 F5P12259 2224 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 CLDN5O00501 218 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 PDXKO00764 312 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 KIF20AO95235 890 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 STAU1O95793 577 aaKnown RBP18.84■□□□□ 0.61
NME3-205ENST00000563854 ABL1P00519 1130 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 CXCL12P48061 93 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 AP3M2P53677 418 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 USP46P62068 366 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 FAM160A1Q05DH4 1040 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 GAS6Q14393 721 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 MTF1Q14872 753 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 WDR44Q5JSH3 913 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 KRBA2Q6ZNG9 492 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 DENND5BQ6ZUT9 1274 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 SLC9A9Q8IVB4 645 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 KIAA2013Q8IYS2 634 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 B3GALNT2Q8NCR0 500 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 SPATA17Q96L03 361 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 MED10Q9BTT4 135 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.84■□□□□ 0.61
NME3-205ENST00000563854 NCDNQ9UBB6 729 aa18.84■□□□□ 0.61
NME3-205ENST00000563854 A0A1W2PQ27 194 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 A0A1W2PQ64 194 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 A0A1W2PQD8 194 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 VNN1O95497 513 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 C4BPAP04003 597 aaKnown RBP18.83■□□□□ 0.6
NME3-205ENST00000563854 PIK3CAP42336 1068 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 IFNAR2P48551 515 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 CACNA2D1P54289 1103 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 DPYDQ12882 1025 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 ZNF268Q14587 947 aaPredicted RBP18.83■□□□□ 0.6
NME3-205ENST00000563854 DGKKQ5KSL6 1271 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 DCLK2Q8N568 766 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 ZBTB44Q8NCP5 570 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 SH3RF2Q8TEC5 729 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 RUBCNQ92622 972 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 FAM83CQ9BQN1 747 aa18.83■□□□□ 0.6
NME3-205ENST00000563854 B3GNT5Q9BYG0 378 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms