RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 CCNE2O96020 404 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 SERPINA6P08185 405 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 CHI3L2Q15782 390 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 KIAA1841Q6NSI8 718 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 LCORLQ8N3X6 602 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 PSPC1Q8WXF1 523 aaKnown RBP6.5□□□□□ -1.37
CLK3-212ENST00000563418 ZNF75CPQ92670 426 aaPredicted RBP6.5□□□□□ -1.37
CLK3-212ENST00000563418 VPS39Q96JC1 886 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 ANAPC7Q9UJX3 599 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 PRPF19Q9UMS4 504 aaKnown RBP6.5□□□□□ -1.37
CLK3-212ENST00000563418 MAPRE3Q9UPY8 281 aa6.5□□□□□ -1.37
CLK3-212ENST00000563418 GSC2O15499 205 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 SORBS3O60504 671 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 ME2P23368 584 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 CDK9P50750 372 aaKnown RBP6.49□□□□□ -1.37
CLK3-212ENST00000563418 SNAP25P60880 206 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 QPCTQ16769 361 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 MDH1BQ5I0G3 518 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 FAM47AQ5JRC9 791 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 DNAJC24Q6P3W2 148 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 TLCD1Q96CP7 247 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 APOPT1Q96IL0 206 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 IRF2BPLQ9H1B7 796 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 DYRK4Q9NR20 520 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 LRRC10BA6NIK2 292 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 TSPAN4O14817 238 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 EIF3DO15371 548 aaKnown RBP eCLIP6.49□□□□□ -1.37
CLK3-212ENST00000563418 CCND2P30279 289 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 GABPAQ06546 454 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 NR5A1Q13285 461 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 BICRALQ6AI39 1079 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 FBXW8Q8N3Y1 598 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 PYDC1Q8WXC3 89 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 KRT35Q92764 455 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 USE1Q9NZ43 259 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 KLHL3Q9UH77 587 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 S100A6P06703 90 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 CYP2J2P51589 502 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 CYB5R4Q7L1T6 521 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 FAF2Q96CS3 445 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 VMP1Q96GC9 406 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 SYT15Q9BQS2 421 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 PACSIN1Q9BY11 444 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 LACRTQ9GZZ8 138 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 VTA1Q9NP79 307 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 TDRKHQ9Y2W6 561 aaKnown RBP6.49□□□□□ -1.37
CLK3-212ENST00000563418 RTCBQ9Y3I0 505 aaKnown RBP6.49□□□□□ -1.37
CLK3-212ENST00000563418 OVOS2A0A0J9YW53 1432 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 OVOS2Q6IE36 1432 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 B8ZZF3 427 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 RPA1P27694 616 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 SLC5A3P53794 718 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 RALGDSQ12967 914 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 NFE2L1Q14494 772 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 ATP13A5Q4VNC0 1218 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 ERAP2Q6P179 960 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 CDAN1Q8IWY9 1227 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 RCOR2Q8IZ40 523 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 PPM1NQ8N819 430 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 POC5Q8NA72 575 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 KCTD6Q8NC69 237 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 CIDECQ96AQ7 238 aaPredicted RBP6.49□□□□□ -1.37
CLK3-212ENST00000563418 TMCO6Q96DC7 493 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 RMDN3Q96TC7 470 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 C7orf25Q9BPX7 421 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 MKNK1Q9BUB5 465 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 SMARCAD1Q9H4L7 1026 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 KIAA1586Q9HCI6 787 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 SMYD2Q9NRG4 433 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 A0A0J9YVX5 310 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 TGDSO95455 350 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 NPR3P17342 541 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 KLRC1P26715 233 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 ADSSP30520 456 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 RAD23AP54725 363 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 TPTEP56180 551 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 PDZK1Q5T2W1 519 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 GOLM1Q8NBJ4 401 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 FBXO25Q8TCJ0 367 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 ATL1Q8WXF7 558 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 FAM213AQ9BRX8 229 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 HIPK3Q9H422 1215 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 IP6K2Q9UHH9 426 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 PFDN2Q9UHV9 154 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 ENOSF1Q7L5Y1 443 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 ERO1BQ86YB8 467 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 KCTD4Q8WVF5 259 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 MND1Q9BWT6 205 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 PTBP2Q9UKA9 531 aaKnown RBP6.49□□□□□ -1.37
CLK3-212ENST00000563418 PALLDQ8WX93 1383 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 HEATR9A2RTY3 570 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 TTLL13PA6NNM8 815 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 SARSP49591 514 aaKnown RBP6.49□□□□□ -1.37
CLK3-212ENST00000563418 GCKRQ14397 625 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 NEDD8Q15843 81 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 SLC9A4Q6AI14 798 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 RAB43Q86YS6 212 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 USP13Q92995 863 aaPredicted RBP6.49□□□□□ -1.37
CLK3-212ENST00000563418 SUCLG2Q96I99 432 aa6.49□□□□□ -1.37
CLK3-212ENST00000563418 RMND5AQ9H871 391 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms