RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 LTBP1Q14766 1721 aa5.67□□□□□ -1.5
SMG1-206ENST00000562668 UTYO14607 1347 aa5.67□□□□□ -1.5
SMG1-206ENST00000562668 ABCC4O15439 1325 aa5.67□□□□□ -1.5
SMG1-206ENST00000562668 PTPRCP08575 1304 aa5.67□□□□□ -1.5
SMG1-206ENST00000562668 RNF123Q5XPI4 1314 aa5.67□□□□□ -1.5
SMG1-206ENST00000562668 A0A1B0GUL6 1792 aa5.67□□□□□ -1.5
SMG1-206ENST00000562668 SLX4Q8IY92 1834 aa5.67□□□□□ -1.5
SMG1-206ENST00000562668 CCDC78A2IDD5 438 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 GPR39O43194 453 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 DDX58O95786 925 aaKnown RBP5.66□□□□□ -1.5
SMG1-206ENST00000562668 PCCAP05165 728 aaPredicted RBP5.66□□□□□ -1.5
SMG1-206ENST00000562668 TRIM27P14373 513 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 DPEP1P16444 411 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 SLC6A9P48067 706 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 HSD11B2P80365 405 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 GCKRQ14397 625 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 CRY2Q49AN0 593 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 NBPF5PQ86XG9 351 aaPredicted RBP5.66□□□□□ -1.5
SMG1-206ENST00000562668 SPATS2Q86XZ4 545 aaKnown RBP5.66□□□□□ -1.5
SMG1-206ENST00000562668 FAM43AQ8N2R8 423 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 CNBD1Q8NA66 436 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 CCDC191Q8NCU4 936 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 LINS1Q8NG48 757 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 KAZALD1Q96I82 304 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 BOD1Q96IK1 185 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 UTP14AQ9BVJ6 771 aaKnown RBP5.66□□□□□ -1.5
SMG1-206ENST00000562668 ALG13Q9NP73 1137 aaKnown RBP5.66□□□□□ -1.5
SMG1-206ENST00000562668 ADARB2Q9NS39 739 aaKnown RBP5.66□□□□□ -1.5
SMG1-206ENST00000562668 TBCCD1Q9NVR7 557 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 USP25Q9UHP3 1055 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 TLK1Q9UKI8 766 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 CDHR2Q9BYE9 1310 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 FER1L6Q2WGJ9 1857 aa5.66□□□□□ -1.5
SMG1-206ENST00000562668 UTRNP46939 3433 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 A0A0G2JLW4 131 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 ALDH1L1O75891 902 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 PRSS23O95084 383 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 GPANK1O95872 356 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 SRGNP10124 158 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 ALAS1P13196 640 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 CHRNA5P30532 468 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 MTM1Q13496 603 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 UBXN2BQ14CS0 331 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 ATF7IPQ6VMQ6 1270 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 Q6ZNX1 250 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 UBE3BQ7Z3V4 1068 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 PPP1R42Q7Z4L9 355 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 BOLLQ8N9W6 283 aaKnown RBP5.65□□□□□ -1.5
SMG1-206ENST00000562668 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.65□□□□□ -1.5
SMG1-206ENST00000562668 NELL1Q92832 810 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 CYFIP2Q96F07 1278 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 MYOCQ99972 504 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 NYXQ9GZU5 481 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 CWC25Q9NXE8 425 aaPredicted RBP5.65□□□□□ -1.5
SMG1-206ENST00000562668 RUVBL1Q9Y265 456 aaKnown RBP5.65□□□□□ -1.5
SMG1-206ENST00000562668 PCDHGA2Q9Y5H1 932 aa5.65□□□□□ -1.5
SMG1-206ENST00000562668 SH3TC1Q8TE82 1336 aa5.65□□□□□ -1.51
SMG1-206ENST00000562668 ARHGEF17Q96PE2 2063 aaPredicted RBP5.65□□□□□ -1.51
SMG1-206ENST00000562668 SPEF2Q9C093 1822 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 DUOX1Q9NRD9 1551 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 CSF1RP07333 972 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 VIL1P09327 827 aaKnown RBP5.64□□□□□ -1.51
SMG1-206ENST00000562668 NBPF7P0C2Y1 421 aaPredicted RBP5.64□□□□□ -1.51
SMG1-206ENST00000562668 GSPT1P15170 499 aaKnown RBP5.64□□□□□ -1.51
SMG1-206ENST00000562668 ZNF37AP17032 561 aaPredicted RBP5.64□□□□□ -1.51
SMG1-206ENST00000562668 PTH2RP49190 550 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 ERVK-21P61565 698 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 SF3B3Q15393 1217 aaKnown RBP5.64□□□□□ -1.51
SMG1-206ENST00000562668 EPHA10Q5JZY3 1008 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 COLEC12Q5KU26 742 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 GIMAP6Q6P9H5 292 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 FOXR2Q6PJQ5 311 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 KRT26Q7Z3Y9 468 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 FAM98AQ8NCA5 519 aaKnown RBP5.64□□□□□ -1.51
SMG1-206ENST00000562668 OR2I1PQ8NGU4 316 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 CAGE1Q8TC20 777 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 COG1Q8WTW3 980 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 NACC2Q96BF6 587 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 DUSP26Q9BV47 211 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 USP44Q9H0E7 712 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 MANSC1Q9H8J5 431 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 RSAD1Q9HA92 442 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 CASS4Q9NQ75 786 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 TRMT112Q9UI30 125 aaKnown RBP5.64□□□□□ -1.51
SMG1-206ENST00000562668 MTO1Q9Y2Z2 717 aaKnown RBP5.64□□□□□ -1.51
SMG1-206ENST00000562668 GPR45Q9Y5Y3 372 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 KIF16BQ96L93 1317 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 RTL9Q8NET4 1388 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 SBF1O95248 1867 aa5.64□□□□□ -1.51
SMG1-206ENST00000562668 GOLGB1Q14789 3259 aaKnown RBP5.63□□□□□ -1.51
SMG1-206ENST00000562668 GRM8O00222 908 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 CNGA1P29973 690 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 PRELPP51888 382 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 VAV2P52735 878 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 ELLP55199 621 aaPredicted RBP5.63□□□□□ -1.51
SMG1-206ENST00000562668 NEXNQ0ZGT2 675 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 ZNF169Q14929 603 aaPredicted RBP5.63□□□□□ -1.51
SMG1-206ENST00000562668 CYP2A13Q16696 494 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 C20orf194Q5TEA3 1177 aa5.63□□□□□ -1.51
SMG1-206ENST00000562668 ZKSCAN2Q63HK3 967 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms