RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 NDUFA13Q9P0J0 144 aa13.14□□□□□ -0.31
SYNM-203ENST00000560674 AP4S1Q9Y587 144 aa13.14□□□□□ -0.31
SYNM-203ENST00000560674 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 CYP2C8P10632 490 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 SOAT1P35610 550 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 AGAP9Q5VTM2 703 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 PAPD7Q5XG87 772 aaKnown RBP13.13□□□□□ -0.31
SYNM-203ENST00000560674 IYDQ6PHW0 289 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 DCP1BQ8IZD4 617 aaKnown RBP13.13□□□□□ -0.31
SYNM-203ENST00000560674 BTN2A2Q8WVV5 523 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 AGBL1Q96MI9 1066 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 BRD8Q9H0E9 1235 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 USP31Q70CQ4 1352 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 LZTS3O60299 673 aaPredicted RBP13.13□□□□□ -0.31
SYNM-203ENST00000560674 PGK2P07205 417 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 NCAM1P13591 858 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 ITGA4P13612 1032 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 ADRM1Q16186 407 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 GPR141Q7Z602 305 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 DIS3LQ8TF46 1054 aaKnown RBP13.13□□□□□ -0.31
SYNM-203ENST00000560674 GPR63Q9BZJ6 419 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 STK25O00506 426 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 FAXCQ5TGI0 409 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 CCNJLQ8IV13 435 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 SCUBE1Q8IWY4 988 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 ZNF34Q8IZ26 560 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 ATG4AQ8WYN0 398 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 KCNH7Q9NS40 1196 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 CAPN6Q9Y6Q1 641 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 SGPL1O95470 568 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 CD44P16070 742 aaKnown RBP13.13□□□□□ -0.31
SYNM-203ENST00000560674 ETFBP38117 255 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 SERPINB8P50452 374 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 CSTF3Q12996 717 aaKnown RBP13.13□□□□□ -0.31
SYNM-203ENST00000560674 EFCAB12Q6NXP0 572 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 DENND1BQ6P3S1 775 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 ACTRT1Q8TDG2 376 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 ZNF512Q96ME7 567 aaPredicted RBP13.13□□□□□ -0.31
SYNM-203ENST00000560674 C17orf75Q9HAS0 396 aa13.13□□□□□ -0.31
SYNM-203ENST00000560674 CYTH3O43739 400 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 TPST1O60507 370 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 MUTP22033 750 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 SERPINB5P36952 375 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 GRB10Q13322 594 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 PTPAQ15257 358 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 XRRA1Q6P2D8 792 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 TRAF7Q6Q0C0 670 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
SYNM-203ENST00000560674 STKLD1Q8NE28 680 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 DDHD1Q8NEL9 900 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 RDM1Q8NG50 284 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 SEPT5Q99719 369 aaPredicted RBP13.12□□□□□ -0.31
SYNM-203ENST00000560674 TARS2Q9BW92 718 aaKnown RBP13.12□□□□□ -0.31
SYNM-203ENST00000560674 BBS2Q9BXC9 721 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 ELP3Q9H9T3 547 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 EFCAB1Q9HAE3 211 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 RPS6KL1Q9Y6S9 549 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 ALKQ9UM73 1620 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 HEATR9A2RTY3 570 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 CTSHP09668 335 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 KCNMA1Q12791 1236 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 TRIM16LQ309B1 348 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 LRRC71Q8N4P6 559 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.12□□□□□ -0.31
SYNM-203ENST00000560674 FOXN3O00409 490 aaPredicted RBP13.12□□□□□ -0.31
SYNM-203ENST00000560674 SKAP2O75563 359 aaPredicted RBP13.12□□□□□ -0.31
SYNM-203ENST00000560674 NUP107P57740 925 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 FIGNQ5HY92 759 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 DENND5BQ6ZUT9 1274 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 ZNF467Q7Z7K2 595 aaPredicted RBP13.12□□□□□ -0.31
SYNM-203ENST00000560674 DYNC1LI2O43237 492 aaPredicted RBP13.12□□□□□ -0.31
SYNM-203ENST00000560674 WBP4O75554 376 aaKnown RBP13.12□□□□□ -0.31
SYNM-203ENST00000560674 CYP11B2P19099 503 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 PSMD7P51665 324 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 HPCAP84074 193 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 YAF2Q8IY57 180 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 TADA1Q96BN2 335 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 CCDC126Q96EE4 140 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 THUMPD3Q9BV44 507 aaKnown RBP13.12□□□□□ -0.31
SYNM-203ENST00000560674 RUSC1Q9BVN2 902 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 EIF3LQ9Y262 564 aaKnown RBP13.12□□□□□ -0.31
SYNM-203ENST00000560674 DUSP10Q9Y6W6 482 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 ADGRB3O60242 1522 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 A0A0G2JLW4 131 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.12□□□□□ -0.31
SYNM-203ENST00000560674 VWA5AO00534 786 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 ITGB3P05106 788 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 FAM200BP0CF97 657 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 CALB2P22676 271 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 GEMP55040 296 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 TMEM62Q0P6H9 643 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 UGT3A1Q6NUS8 523 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 USE1Q9NZ43 259 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 L1RE1Q9UN81 338 aa13.12□□□□□ -0.31
SYNM-203ENST00000560674 SLC37A4O43826 429 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 PSMC3P17980 439 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 EPHB2P29323 1055 aa13.11□□□□□ -0.31
SYNM-203ENST00000560674 PNPLA4P41247 253 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms