RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 MAGEF1Q9HAY2 307 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 GKN1Q9NS71 199 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 TMEM30AQ9NV96 361 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 GCNT4Q9P109 453 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 TFIP11Q9UBB9 837 aaKnown RBP10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 GMEB2Q9UKD1 530 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 PLXND1Q9Y4D7 1925 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 NCOR2Q9Y618 2525 aa10.87□□□□□ -0.67
SNRPA1-212ENST00000560496 CLIC2O15247 247 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 HRO43593 1189 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 F13A1P00488 732 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 TCF3P15923 654 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 HOXA6P31267 233 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 CACNA2D1P54289 1103 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 USP46P62068 366 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 ZXDBP98169 803 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 CYP24A1Q07973 514 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 MYO1EQ12965 1108 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 TRAPPC11Q7Z392 1133 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 WDR5BQ86VZ2 330 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 LONP2Q86WA8 852 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 SCN4BQ8IWT1 228 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 NELFCDQ8IXH7 590 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 C12orf56Q8IXR9 622 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 SYNPOQ8N3V7 929 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 GPR161Q8N6U8 529 aaKnown RBP10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 IQUBQ8NA54 791 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 PLEKHO2Q8TD55 490 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 FOXD4L4Q8WXT5 416 aaPredicted RBP10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 SECISBP2LQ93073 1101 aaKnown RBP10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 PCED1BQ96HM7 432 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 SPATA17Q96L03 361 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 ZNF396Q96N95 335 aaPredicted RBP10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 MRPL45Q9BRJ2 306 aaKnown RBP10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 LRRC27Q9C0I9 530 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 BLZF1Q9H2G9 400 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 KIAA1586Q9HCI6 787 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 TRPC7Q9HCX4 862 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 THG1LQ9NWX6 298 aaKnown RBP10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 CDH9Q9ULB4 789 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 USP18Q9UMW8 372 aa10.86□□□□□ -0.67
SNRPA1-212ENST00000560496 MYH10P35580 1976 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 TRDMT1O14717 391 aaKnown RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 POLR2DO15514 142 aaKnown RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 RNF40O75150 1001 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 STAU1O95793 577 aaKnown RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 OLFM2O95897 454 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 CST3P01034 146 aaPredicted RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 EGFP01133 1207 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 CKMP06732 381 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 RETP07949 1114 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 ZSCAN22P10073 491 aaPredicted RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 DLATP10515 647 aaKnown RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 BDNFP23560 247 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 CYP2J2P51589 502 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 LMNB2Q03252 620 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 SPEM2Q0P670 501 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 CUL4BQ13620 913 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 SURF1Q15526 300 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 DUOXA2Q1HG44 320 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 EML3Q32P44 896 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 RESP18Q5W5W9 173 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 HEATR6Q6AI08 1181 aaKnown RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 VSTM1Q6UX27 236 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 C4orf50Q6ZRC1 276 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 PRR23BQ6ZRT6 265 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 GRAMD1CQ8IYS0 662 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 ARL14EPQ8N8R7 260 aaPredicted RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 RDH13Q8NBN7 331 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 OSCP1Q8WVF1 389 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 ZNF516Q92618 1163 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 TTLL2Q9BWV7 592 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 XYLT2Q9H1B5 865 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 DPEP3Q9H4B8 488 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 FBRSL1Q9HCM7 1045 aaKnown RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 POLR3BQ9NW08 1133 aaPredicted RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 PCDHA7Q9UN72 937 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 WNT6Q9Y6F9 365 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 ASPMQ8IZT6 3477 aa10.85□□□□□ -0.67
SNRPA1-212ENST00000560496 TRAV19A0A0A6YYK7 116 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 ACTN4O43707 911 aaKnown RBP10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 KLRC4O43908 158 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 LRP3O75074 770 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 TACC1O75410 805 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 USP17L7P0C7H9 530 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 CNR2P34972 360 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 GJA4P35212 333 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 CASP4P49662 377 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 AMPD3Q01432 767 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 SIM2Q14190 667 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 PDGFRLQ15198 375 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 GAB4Q2WGN9 574 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 FOXD4L6Q3SYB3 417 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 MDH1BQ5I0G3 518 aa10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 FOXD4L3Q6VB84 417 aaPredicted RBP10.84□□□□□ -0.67
SNRPA1-212ENST00000560496 XXYLT1Q8NBI6 393 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms