RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 TP73O15350 636 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 RARBP10826 455 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 VDRP11473 427 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 CHKAP35790 457 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 ZBTB6Q15916 424 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 KYAT1Q16773 422 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 EP400NLQ6ZTU2 488 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 GSTA5Q7RTV2 222 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 SCUBE3Q8IX30 993 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 C12orf50Q8NA57 414 aaPredicted RBP14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 EXD1Q8NHP7 514 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 CLEC4CQ8WTT0 213 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 EPB41L4BQ9H329 900 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 CDY2AQ9Y6F7 541 aa14.83□□□□□ -0.03
CARMIL3-203ENST00000560349 SIGLEC16A6NMB1 481 aa14.83□□□□□ -0.04
CARMIL3-203ENST00000560349 CCND3P30281 292 aaPredicted RBP14.83□□□□□ -0.04
CARMIL3-203ENST00000560349 RABGGTBP53611 331 aa14.83□□□□□ -0.04
CARMIL3-203ENST00000560349 CNGA2Q16280 664 aa14.83□□□□□ -0.04
CARMIL3-203ENST00000560349 SPOCD1Q6ZMY3 1216 aa14.83□□□□□ -0.04
CARMIL3-203ENST00000560349 RNF169Q8NCN4 708 aa14.83□□□□□ -0.04
CARMIL3-203ENST00000560349 CNTN3Q9P232 1028 aa14.83□□□□□ -0.04
CARMIL3-203ENST00000560349 STRIP2Q9ULQ0 834 aa14.83□□□□□ -0.04
CARMIL3-203ENST00000560349 TLL2Q9Y6L7 1015 aa14.83□□□□□ -0.04
CARMIL3-203ENST00000560349 PODXLO00592 558 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 CYBAP13498 195 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 ACAT1P24752 427 aaKnown RBP14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 ALKAL1Q6UXT8 129 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 CFAP57Q96MR6 1250 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 ATP2C2O75185 946 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 MAN1A1P33908 653 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 ADCY8P40145 1251 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 SLCO1A2P46721 670 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 NRLP54845 237 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 SLC25A11Q02978 314 aaKnown RBP14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 IFFO1Q0D2I5 559 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 SREBF2Q12772 1141 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 MTM1Q13496 603 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 PIGHQ14442 188 aaPredicted RBP14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 FBXO47Q5MNV8 452 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 PEBP4Q96S96 227 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 DDX23Q9BUQ8 820 aaKnown RBP14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 KATNAL1Q9BW62 490 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 GPATCH2LQ9NWQ4 482 aa14.82□□□□□ -0.04
CARMIL3-203ENST00000560349 TLDC2A0PJX2 215 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 EBAG9O00559 213 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 CA12O43570 354 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 DUSP11O75319 330 aaKnown RBP14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 PPFIA2O75334 1257 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 HMGCRP04035 888 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 MIPP30301 263 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 MLH1P40692 756 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 CRYBB1P53674 252 aaPredicted RBP14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 PMS2P54278 862 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 PLCB3Q01970 1234 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 MMRN1Q13201 1228 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 SLC29A2Q14542 456 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 KRT71Q3SY84 523 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 LRRN4Q8WUT4 740 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 KBTBD7Q8WVZ9 684 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 PLEKHA5Q9HAU0 1116 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 PTGESO14684 152 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 GABBR2O75899 941 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 MAP3K6O95382 1288 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 ACSL3O95573 720 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 IFNB1P01574 187 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 TFE3P19532 575 aaPredicted RBP14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 ITGA8P53708 1063 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 CACNB2Q08289 660 aaPredicted RBP14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 CALCOCO2Q13137 446 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 HP1BP3Q5SSJ5 553 aaPredicted RBP14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 EIF1ADQ8N9N8 165 aaKnown RBP14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 PPM1EQ8WY54 764 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 NDRG1Q92597 394 aaKnown RBP14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 TMEM121Q9BTD3 319 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 CALN1Q9BXU9 219 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 TXLNGYQ9BZA5 131 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 UBQLN1Q9UMX0 589 aaKnown RBP14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 ST3GAL5Q9UNP4 418 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 ZNF148Q9UQR1 794 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 TIMM13Q9Y5L4 95 aaPredicted RBP14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 FAM169AQ9Y6X4 670 aa14.81□□□□□ -0.04
CARMIL3-203ENST00000560349 hCG_1818297A0A087WSY0 165 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 KPNA7A9QM74 516 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 IGHA2P01877 340 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 MYZAPP0CAP1 466 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 CDKN2BP42772 138 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 TTC31Q49AM3 519 aaPredicted RBP14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 PAN2Q504Q3 1202 aaKnown RBP14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 PPP1R2P3Q6NXS1 205 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 SCYL2Q6P3W7 929 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 LCLAT1Q6UWP7 414 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 RXFP2Q8WXD0 754 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 RBM41Q96IZ5 413 aaKnown RBP14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 A0A087WUV0 522 aaPredicted RBP14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 GOLGA6L10A6NI86 522 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 CLDN5O00501 218 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 CHRNA1P02708 482 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 LCP1P13796 627 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 PDGFRAP16234 1089 aa14.8□□□□□ -0.04
CARMIL3-203ENST00000560349 IVDP26440 423 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms