RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CKMP06732 381 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 P2RY2P41231 377 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 RPL10AP62906 217 aaKnown RBP21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 TSPY1Q01534 308 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 SV2CQ496J9 727 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 ZC2HC1CQ53FD0 456 aaPredicted RBP21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 TRIM61Q5EBN2 209 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 KIAA1211LQ6NV74 962 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 PDCL2Q8N4E4 241 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 MYCT1Q8N699 235 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 ARL14EPQ8N8R7 260 aaPredicted RBP21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 SH3RF2Q8TEC5 729 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 TRPC7Q9HCX4 862 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 SMG1Q96Q15 3661 aaKnown RBP21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 CACNA1EQ15878 2313 aa21.26■□□□□ 0.99
RABGGTA-214ENST00000560163 C2orf78A6NCI8 922 aa21.25■□□□□ 0.99
RABGGTA-214ENST00000560163 TAF4O00268 1085 aa21.25■□□□□ 0.99
RABGGTA-214ENST00000560163 SEC13P55735 322 aa21.25■□□□□ 0.99
RABGGTA-214ENST00000560163 SEMA3BQ13214 749 aa21.25■□□□□ 0.99
RABGGTA-214ENST00000560163 CCDC33Q8N5R6 958 aa21.25■□□□□ 0.99
RABGGTA-214ENST00000560163 FRMD1Q8N878 549 aa21.25■□□□□ 0.99
RABGGTA-214ENST00000560163 SLC32A1Q9H598 525 aa21.25■□□□□ 0.99
RABGGTA-214ENST00000560163 PARVGQ9HBI0 331 aa21.25■□□□□ 0.99
RABGGTA-214ENST00000560163 ARHGAP26Q9UNA1 814 aa21.25■□□□□ 0.99
RABGGTA-214ENST00000560163 HELZP42694 1942 aaKnown RBP21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 ENGP17813 658 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 PTGER3P43115 390 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 MRPS21P82921 87 aaKnown RBP21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 INTS6LQ5JSJ4 861 aaKnown RBP21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 ADALQ6DHV7 355 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 SLC23A3Q6PIS1 610 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 GPBP1Q86WP2 473 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 SYT12Q8IV01 421 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 FAM184AQ8NB25 1140 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 TTC16Q8NEE8 873 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 RLN3Q8WXF3 142 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 NUSAP1Q9BXS6 441 aaKnown RBP21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 MBD1Q9UIS9 605 aaPredicted RBP21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 GTF3C4Q9UKN8 822 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 AGO2Q9UKV8 859 aaKnown RBP21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 L1RE1Q9UN81 338 aa21.24■□□□□ 0.99
RABGGTA-214ENST00000560163 PLXND1Q9Y4D7 1925 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 PI4KAP42356 2102 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 SPAARA0A1B0GVQ0 90 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 VWA3AA6NCI4 1184 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 NFATC1O95644 943 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 HDCP19113 662 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 MESP2Q0VG99 397 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 CCDC142Q17RM4 750 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 CFAP221Q4G0U5 840 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 SPDYCQ5MJ68 293 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 PEAR1Q5VY43 1037 aaPredicted RBP21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 SCARA3Q6AZY7 606 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 SLFN12LQ6IEE8 588 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 LPCAT2Q7L5N7 544 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 NT5DC4Q86YG4 428 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 SFTPA1Q8IWL2 248 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 TMEFF1Q8IYR6 380 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 ADGRG2Q8IZP9 1017 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 IL17RCQ8NAC3 791 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 CXorf38Q8TB03 319 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 CDK5RAP3Q96JB5 506 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 BLOC1S4Q9NUP1 217 aa21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 DDX43Q9NXZ2 648 aaKnown RBP21.23■□□□□ 0.99
RABGGTA-214ENST00000560163 A0A0A0MRY4 1105 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 FAM13AO94988 1023 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 ACAT1P24752 427 aaKnown RBP21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 ADSSP30520 456 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 ABCD1P33897 745 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 PNPLA4P41247 253 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 MAPK8P45983 427 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 WNT7BP56706 349 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 MAP7D1Q3KQU3 841 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 FSIP1Q8NA03 581 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 ZNF560Q96MR9 790 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 IKZF4Q9H2S9 585 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 ST6GALNAC4Q9H4F1 302 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 PILRBQ9UKJ0 227 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 GCN1Q92616 2671 aaKnown RBP21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 GON4LQ3T8J9 2241 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 IGSF10Q6WRI0 2623 aa21.22■□□□□ 0.99
RABGGTA-214ENST00000560163 SGK1O00141 431 aa21.21■□□□□ 0.99
RABGGTA-214ENST00000560163 SIM1P81133 766 aaPredicted RBP21.21■□□□□ 0.99
RABGGTA-214ENST00000560163 RILPL1Q5EBL4 403 aa21.21■□□□□ 0.99
RABGGTA-214ENST00000560163 ARL6IP4Q66PJ3 421 aaKnown RBP21.21■□□□□ 0.99
RABGGTA-214ENST00000560163 OSTM1Q86WC4 334 aa21.21■□□□□ 0.99
RABGGTA-214ENST00000560163 ALLCQ8N6M5 410 aa21.21■□□□□ 0.99
RABGGTA-214ENST00000560163 CELSR3Q9NYQ7 3312 aa21.21■□□□□ 0.99
RABGGTA-214ENST00000560163 GABRDO14764 452 aa21.2■□□□□ 0.98
RABGGTA-214ENST00000560163 SLC26A4O43511 780 aa21.2■□□□□ 0.98
RABGGTA-214ENST00000560163 ALDH1A2O94788 518 aa21.2■□□□□ 0.98
RABGGTA-214ENST00000560163 IL18RAPO95256 599 aa21.2■□□□□ 0.98
RABGGTA-214ENST00000560163 CYP17A1P05093 508 aa21.2■□□□□ 0.98
RABGGTA-214ENST00000560163 SLC6A11P48066 632 aa21.2■□□□□ 0.98
RABGGTA-214ENST00000560163 DHX8Q14562 1220 aaKnown RBP21.2■□□□□ 0.98
RABGGTA-214ENST00000560163 KCNB1Q14721 858 aa21.2■□□□□ 0.98
RABGGTA-214ENST00000560163 FAM171BQ6P995 826 aa21.2■□□□□ 0.98
RABGGTA-214ENST00000560163 ARMCX6Q7L4S7 300 aa21.2■□□□□ 0.98
RABGGTA-214ENST00000560163 TMEM86AQ8N2M4 240 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms