RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 BDNFP23560 247 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 HOXA9P31269 272 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 MAGEA11P43364 429 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 MFAP3P55082 362 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 TSPY1Q01534 308 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 DRAP1Q14919 205 aaPredicted RBP9.61□□□□□ -0.87
HMG20A-209ENST00000559728 NFE2Q16621 373 aaPredicted RBP9.61□□□□□ -0.87
HMG20A-209ENST00000559728 UVSSAQ2YD98 709 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 PKDCCQ504Y2 493 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 SDHAF4Q5VUM1 108 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 E4F1Q66K89 784 aaPredicted RBP9.61□□□□□ -0.87
HMG20A-209ENST00000559728 ENOSF1Q7L5Y1 443 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 FAM35AQ86V20 835 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 TTC30AQ86WT1 665 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 TTC39CQ8N584 583 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 SMRP1Q8NCR6 262 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 STKLD1Q8NE28 680 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.61□□□□□ -0.87
HMG20A-209ENST00000559728 SPPL2BQ8TCT7 592 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 SLC2A14Q8TDB8 520 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 C2orf15Q8WU43 125 aaKnown RBP9.61□□□□□ -0.87
HMG20A-209ENST00000559728 SUSD6Q92537 303 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 FUBP3Q96I24 572 aaKnown RBP eCLIP9.61□□□□□ -0.87
HMG20A-209ENST00000559728 TNIP3Q96KP6 325 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 HNRNPABQ99729 332 aaKnown RBP9.61□□□□□ -0.87
HMG20A-209ENST00000559728 SMOQ99835 787 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 APOL5Q9BWW9 433 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 CYP4F11Q9HBI6 524 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 CSNK1G1Q9HCP0 422 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 FAM49BQ9NUQ9 324 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 ZDHHC7Q9NXF8 308 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 ABI2Q9NYB9 513 aaPredicted RBP9.61□□□□□ -0.87
HMG20A-209ENST00000559728 PCDHB5Q9Y5E4 795 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 PCDHB4Q9Y5E5 795 aa9.61□□□□□ -0.87
HMG20A-209ENST00000559728 FSD2A1L4K1 749 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 TULP2O00295 520 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 TNFRSF10BO14763 440 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 CYP26A1O43174 497 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 MOSPD3O75425 235 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 PAEPP09466 180 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 HMGA1P17096 107 aaKnown RBP9.6□□□□□ -0.87
HMG20A-209ENST00000559728 COL9A1P20849 921 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 KCNA5P22460 613 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 POLR2FP61218 127 aaKnown RBP9.6□□□□□ -0.87
HMG20A-209ENST00000559728 TPM4P67936 248 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 NTHL1P78549 312 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 TFF2Q03403 129 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 TWF1Q12792 350 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 MTMR3Q13615 1198 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 MAPRE1Q15691 268 aaKnown RBP9.6□□□□□ -0.87
HMG20A-209ENST00000559728 DDR2Q16832 855 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 ARHGAP44Q17R89 818 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 LEXMQ3ZCV2 418 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 FIGNQ5HY92 759 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 RARS2Q5T160 578 aaKnown RBP9.6□□□□□ -0.87
HMG20A-209ENST00000559728 DMRTA1Q5VZB9 504 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 TMC5Q6UXY8 1006 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 CLEC20AQ6ZU45 233 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 RTL10Q7L3V2 364 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 GPR149Q86SP6 731 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 SLC47A2Q86VL8 602 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 TMC8Q8IU68 726 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 GPR152Q8TDT2 470 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 DDX1Q92499 740 aaKnown RBP9.6□□□□□ -0.87
HMG20A-209ENST00000559728 HLA-CQ95604 372 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 CYFIP2Q96F07 1278 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 HEXIM2Q96MH2 286 aaKnown RBP9.6□□□□□ -0.87
HMG20A-209ENST00000559728 KCNK16Q96T55 309 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 PRKD2Q9BZL6 878 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 ADAM7Q9H2U9 754 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 SFXN1Q9H9B4 322 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 ZNF334Q9HCZ1 680 aaPredicted RBP9.6□□□□□ -0.87
HMG20A-209ENST00000559728 DZANK1Q9NVP4 752 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 HCFC1R1Q9NWW0 138 aa9.6□□□□□ -0.87
HMG20A-209ENST00000559728 DNMT3BQ9UBC3 853 aaKnown RBP9.6□□□□□ -0.87
HMG20A-209ENST00000559728 PLXNA3P51805 1871 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 MYO9BQ13459 2157 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 CCDC195A0A1B0GUA6 201 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 F8VP50 259 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 CCL16O15467 120 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 CLSTN1O94985 981 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 GYPCP04921 128 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 TPM2P07951 284 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 HNRNPA1P09651 372 aaKnown RBP eCLIP9.59□□□□□ -0.87
HMG20A-209ENST00000559728 VDRP11473 427 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 HOXB8P17481 243 aaPredicted RBP9.59□□□□□ -0.87
HMG20A-209ENST00000559728 RFX1P22670 979 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 BRD2P25440 801 aaKnown RBP9.59□□□□□ -0.87
HMG20A-209ENST00000559728 CCR2P41597 374 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 EPHA5P54756 1037 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 USP46P62068 366 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 YWHAEP62258 255 aaKnown RBP9.59□□□□□ -0.87
HMG20A-209ENST00000559728 CYP27A1Q02318 531 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 RAPGEF1Q13905 1077 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 CLUL1Q15846 466 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 CNGA2Q16280 664 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 MGAT5BQ3V5L5 792 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 FILIP1LQ4L180 1135 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 PPM1LQ5SGD2 360 aa9.59□□□□□ -0.87
HMG20A-209ENST00000559728 LCLAT1Q6UWP7 414 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms