RNA–Protein interactions for RNA: ENST00000559212.1

PCAT29-203, prostate cancer associated transcript 29, humanhuman

TSL 3 BASIC

Gene PCAT29, Length 647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-203ENST00000559212 VSTM1Q6UX27 236 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 CACNA2D4Q7Z3S7 1137 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 CBWD2Q8IUF1 395 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 WDR49Q8IV35 697 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 CAMKK1Q8N5S9 505 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 ARL14EPQ8N8R7 260 aaPredicted RBP11.33□□□□□ -0.6
PCAT29-203ENST00000559212 GLIS3Q8NEA6 775 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 OR5B17Q8NGF7 314 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 ATP2A3Q93084 1043 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 HPS3Q969F9 1004 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 CUEDC2Q9H467 287 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 ECT2Q9H8V3 914 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 HSPBP1Q9NZL4 362 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 PTPRJQ12913 1337 aa11.33□□□□□ -0.6
PCAT29-203ENST00000559212 GPR179Q6PRD1 2367 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 C2orf78A6NCI8 922 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 SPTLC2O15270 562 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 EIF3DO15371 548 aaKnown RBP eCLIP11.32□□□□□ -0.6
PCAT29-203ENST00000559212 GDF9O60383 454 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 WARSP23381 471 aaKnown RBP11.32□□□□□ -0.6
PCAT29-203ENST00000559212 BDNFP23560 247 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 LMO2P25791 158 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 ANXA13P27216 316 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 GRIK1P39086 918 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 PDE6CP51160 858 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 ASIC1P78348 528 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 CYP27A1Q02318 531 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 NR1H3Q13133 447 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
PCAT29-203ENST00000559212 LIMS2Q7Z4I7 341 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 C12orf50Q8NA57 414 aaPredicted RBP11.32□□□□□ -0.6
PCAT29-203ENST00000559212 RDH13Q8NBN7 331 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 LINC00301Q8NCQ3 95 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 SH3RF2Q8TEC5 729 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 KBTBD7Q8WVZ9 684 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 CD101Q93033 1021 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 MYLPFQ96A32 169 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 LOXL4Q96JB6 756 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 SPATA17Q96L03 361 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 ZNF396Q96N95 335 aaPredicted RBP11.32□□□□□ -0.6
PCAT29-203ENST00000559212 SLC22A12Q96S37 553 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 MMS19Q96T76 1030 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 TRIM9Q9C026 710 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 ARRDC1-AS1Q9H2J1 176 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 FBRSL1Q9HCM7 1045 aaKnown RBP11.32□□□□□ -0.6
PCAT29-203ENST00000559212 KBTBD4Q9NVX7 518 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 GCNT4Q9P109 453 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 WNT6Q9Y6F9 365 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 HELZP42694 1942 aaKnown RBP11.32□□□□□ -0.6
PCAT29-203ENST00000559212 GREB1Q4ZG55 1949 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 ANAPC1Q9H1A4 1944 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 CACNA1AO00555 2505 aa11.32□□□□□ -0.6
PCAT29-203ENST00000559212 TRIM66O15016 1216 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 PPP6R2O75170 966 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 AKAP3O75969 853 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 EPN2O95208 641 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 PDGFRBP09619 1106 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 TCF3P15923 654 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 HDCP19113 662 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 TNNI1P19237 187 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 PSMD2Q13200 908 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 E2F4Q16254 413 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 EML3Q32P44 896 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 PPM1JQ5JR12 505 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 FAM26FQ5R3K3 315 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 NAIF1Q69YI7 327 aaPredicted RBP11.31□□□□□ -0.6
PCAT29-203ENST00000559212 DENND5BQ6ZUT9 1274 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 TRAPPC11Q7Z392 1133 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 KBTBD6Q86V97 674 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 RPLP0P6Q8NHW5 317 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 ZNF507Q8TCN5 953 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 ACDQ96AP0 544 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 DHX58Q96C10 678 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 CEP295NLQ96MC4 621 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 CNTNAP3BQ96NU0 1288 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 HHIPQ96QV1 700 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 FNBP1Q96RU3 617 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 CNTNAP3Q9BZ76 1288 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 SNX25Q9H3E2 840 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 CRTAC1Q9NQ79 661 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 EHD2Q9NZN4 543 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 TRPM5Q9NZQ8 1165 aa11.31□□□□□ -0.6
PCAT29-203ENST00000559212 KIAA1549LQ6ZVL6 1849 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 K7ELQ4 463 aaPredicted RBP11.3□□□□□ -0.6
PCAT29-203ENST00000559212 CLIC2O15247 247 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 CUTAO60888 179 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 NFATC1O95644 943 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 ADRB1P08588 477 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 ZNF806P0C7X5 589 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 DLATP10515 647 aaKnown RBP11.3□□□□□ -0.6
PCAT29-203ENST00000559212 PFKLP17858 780 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 HOXD13P35453 343 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 GNL1P36915 607 aaPredicted RBP11.3□□□□□ -0.6
PCAT29-203ENST00000559212 RAP1GAPP47736 663 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 CYP2J2P51589 502 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 TNNC1P63316 161 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 DMC1Q14565 340 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 SF3A2Q15428 464 aaKnown RBP11.3□□□□□ -0.6
PCAT29-203ENST00000559212 CCDC6Q16204 474 aa11.3□□□□□ -0.6
PCAT29-203ENST00000559212 SNRNP35Q16560 246 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms