RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 KCNQ3O43525 872 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 BTF3P20290 206 aaKnown RBP5.21□□□□□ -1.58
CASC4-206ENST00000558847 ITGALP20701 1170 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 PXNP49023 591 aaPredicted RBP5.21□□□□□ -1.58
CASC4-206ENST00000558847 RENBPP51606 427 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 PTTG1IPP53801 180 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 KRTAP1-1Q07627 177 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 FAM102AQ5T9C2 384 aaPredicted RBP5.21□□□□□ -1.58
CASC4-206ENST00000558847 TSHZ3Q63HK5 1081 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 SFRP4Q6FHJ7 346 aaPredicted RBP5.21□□□□□ -1.58
CASC4-206ENST00000558847 CLNKQ7Z7G1 428 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 CACNA2D3Q8IZS8 1091 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 MYCT1Q8N699 235 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 AMER2Q8N7J2 671 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 OR56A1Q8NGH5 318 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 POC1BQ8TC44 478 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 ZNF483Q8TF39 744 aaPredicted RBP5.21□□□□□ -1.58
CASC4-206ENST00000558847 RAPGEF4Q8WZA2 1011 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 SLC46A1Q96NT5 459 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 NELL2Q99435 816 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 TLR10Q9BXR5 811 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.21□□□□□ -1.58
CASC4-206ENST00000558847 ZBTB26Q9HCK0 441 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 ETAA1Q9NY74 926 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 RGL1Q9NZL6 768 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 EIF2B4Q9UI10 523 aaKnown RBP5.21□□□□□ -1.58
CASC4-206ENST00000558847 XDHP47989 1333 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 SPATA31A3Q5VYP0 1347 aa5.21□□□□□ -1.58
CASC4-206ENST00000558847 A0A1B0GTW7 788 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 GAGE12BA1L429 117 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 GAGE12HA6NDE8 117 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 TMEM233B4DJY2 109 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 RAB27BO00194 218 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 IRAK2O43187 625 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 PPFIA2O75334 1257 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 ERN1O75460 977 aaKnown RBP5.2□□□□□ -1.58
CASC4-206ENST00000558847 GLP2RO95838 553 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 GPANK1O95872 356 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 KCNA2P16389 499 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 MAKP20794 623 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 PDIA3P30101 505 aaKnown RBP5.2□□□□□ -1.58
CASC4-206ENST00000558847 PPIFP30405 207 aaKnown RBP5.2□□□□□ -1.58
CASC4-206ENST00000558847 GCLCP48506 637 aaPredicted RBP5.2□□□□□ -1.58
CASC4-206ENST00000558847 ANXA11P50995 505 aaKnown RBP5.2□□□□□ -1.58
CASC4-206ENST00000558847 PPFIA1Q13136 1202 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 PTK2BQ14289 1009 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 RAB30Q15771 203 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 PFKFB4Q16877 469 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 SPDYE7PQ495Y7 208 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 ALFQ53S48 1182 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 MRNIPQ6NTE8 343 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 GATAD2AQ86YP4 633 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 PSD4Q8NDX1 1056 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 FAM71BQ8TC56 605 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 MARS2Q96GW9 593 aaKnown RBP5.2□□□□□ -1.58
CASC4-206ENST00000558847 GDF15Q99988 308 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 TMEM120AQ9BXJ8 343 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 TTYH3Q9C0H2 523 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 DACT1Q9NYF0 836 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 TMOD4Q9NZQ9 345 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 KCNE5Q9UJ90 142 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 ANAPC4Q9UJX5 808 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 CHST2Q9Y4C5 530 aa5.2□□□□□ -1.58
CASC4-206ENST00000558847 FAM234BA2RU67 622 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 TOR1BO14657 336 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 NPC1O15118 1278 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 SH3BP5O60239 455 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 PPFIA4O75335 1185 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 VPS4BO75351 444 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 PAX3P23760 479 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 GABRB3P28472 473 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 SLC5A2P31639 672 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 APOBEC3AP31941 199 aaPredicted RBP5.19□□□□□ -1.58
CASC4-206ENST00000558847 PRKG1Q13976 671 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 SPARCL1Q14515 664 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 HLXQ14774 488 aaPredicted RBP5.19□□□□□ -1.58
CASC4-206ENST00000558847 MAPKAPK3Q16644 382 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 TUBB8Q3ZCM7 444 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 PREPLQ4J6C6 727 aaPredicted RBP5.19□□□□□ -1.58
CASC4-206ENST00000558847 RABL3Q5HYI8 236 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 FNDC7Q5VTL7 733 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 RRAGBQ5VZM2 374 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 PLAG1Q6DJT9 500 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 LDHAL6AQ6ZMR3 332 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 PAF1Q8N7H5 531 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 GCC1Q96CN9 775 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 NEU1Q99519 415 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 PTDSS2Q9BVG9 487 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.19□□□□□ -1.58
CASC4-206ENST00000558847 OBP2BQ9NPH6 170 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 LRFN1Q9P244 771 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 MTO1Q9Y2Z2 717 aaKnown RBP5.19□□□□□ -1.58
CASC4-206ENST00000558847 USP15Q9Y4E8 981 aaPredicted RBP5.19□□□□□ -1.58
CASC4-206ENST00000558847 CDY1Q9Y6F8 540 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 FPGT-TNNI3KV9GXZ4 949 aa5.19□□□□□ -1.58
CASC4-206ENST00000558847 PRAMEF33A0A0G2JMD5 474 aa5.18□□□□□ -1.58
CASC4-206ENST00000558847 A0A1W2PS29 197 aa5.18□□□□□ -1.58
CASC4-206ENST00000558847 AHRRA9YTQ3 701 aa5.18□□□□□ -1.58
CASC4-206ENST00000558847 LEFTY2O00292 366 aa5.18□□□□□ -1.58
CASC4-206ENST00000558847 TRIAP1O43715 76 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms