RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 WEE1P30291 646 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 CCR3P51677 355 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 COPS2P61201 443 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 RPL10AP62906 217 aaKnown RBP8.65□□□□□ -1.02
TRAF3-205ENST00000558700 RBP5P82980 135 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 CYP4F8P98187 520 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 MYO1EQ12965 1108 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 INTS6LQ5JSJ4 861 aaKnown RBP8.65□□□□□ -1.02
TRAF3-205ENST00000558700 FAM26FQ5R3K3 315 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 BPHLQ86WA6 291 aaPredicted RBP8.65□□□□□ -1.02
TRAF3-205ENST00000558700 ARID3BQ8IVW6 561 aaPredicted RBP8.65□□□□□ -1.02
TRAF3-205ENST00000558700 PDCL2Q8N4E4 241 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 TOP6BLQ8N6T0 577 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 GIPC2Q8TF65 315 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 ATRIPQ8WXE1 791 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 RUBCNQ92622 972 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 RSPRY1Q96DX4 576 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 MKNK1Q9BUB5 465 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 PCIF1Q9H4Z3 704 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 TASP1Q9H6P5 420 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 IL21Q9HBE4 155 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 KIAA1586Q9HCI6 787 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 PDE11AQ9HCR9 933 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 THG1LQ9NWX6 298 aaKnown RBP8.65□□□□□ -1.02
TRAF3-205ENST00000558700 ZSCAN32Q9NX65 697 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 GDAP2Q9NXN4 497 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 UXTQ9UBK9 157 aaPredicted RBP8.65□□□□□ -1.02
TRAF3-205ENST00000558700 EGFL7Q9UHF1 273 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 VPS13AQ96RL7 3174 aa8.65□□□□□ -1.02
TRAF3-205ENST00000558700 F5P12259 2224 aa8.65□□□□□ -1.03
TRAF3-205ENST00000558700 OTOGLQ3ZCN5 2332 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 CFAP54Q96N23 3096 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 ZNF233A6NK53 670 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 SHISA7A6NL88 538 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 SLC38A8A6NNN8 435 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 SOBPA7XYQ1 873 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 PRPF40AO75400 957 aaKnown RBP8.64□□□□□ -1.03
TRAF3-205ENST00000558700 F13A1P00488 732 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 CCNE1P24864 410 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 AVPR1AP37288 418 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 ME1P48163 572 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 LHX1P48742 406 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 NRLP54845 237 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 NLRP12P59046 1061 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 FOXK2Q01167 660 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 USP4Q13107 963 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 MTAPQ13126 283 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 ATL3Q6DD88 541 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 CNNM4Q6P4Q7 775 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 UNC13DQ70J99 1090 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 HS2ST1Q7LGA3 356 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 LRRTM3Q86VH5 581 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 RALGPS2Q86X27 583 aaPredicted RBP8.64□□□□□ -1.03
TRAF3-205ENST00000558700 SPATA2LQ8IUW3 424 aaPredicted RBP8.64□□□□□ -1.03
TRAF3-205ENST00000558700 WDR49Q8IV35 697 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 CMTM8Q8IZV2 173 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 CSGALNACT2Q8N6G5 542 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 CELF5Q8N6W0 485 aaKnown RBP8.64□□□□□ -1.03
TRAF3-205ENST00000558700 ZBTB44Q8NCP5 570 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 ZSWIM2Q8NEG5 633 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 BPIFB1Q8TDL5 484 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 MRPS31Q92665 395 aaKnown RBP8.64□□□□□ -1.03
TRAF3-205ENST00000558700 SECISBP2LQ93073 1101 aaKnown RBP8.64□□□□□ -1.03
TRAF3-205ENST00000558700 MRRFQ96E11 262 aaKnown RBP8.64□□□□□ -1.03
TRAF3-205ENST00000558700 FUBP3Q96I24 572 aaKnown RBP eCLIP8.64□□□□□ -1.03
TRAF3-205ENST00000558700 ACBD6Q9BR61 282 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 PI4K2AQ9BTU6 479 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 PRDM9Q9NQV7 894 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 INTS13Q9NVM9 706 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 DDX43Q9NXZ2 648 aaKnown RBP8.64□□□□□ -1.03
TRAF3-205ENST00000558700 FAM13BQ9NYF5 915 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 HSPBP1Q9NZL4 362 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 NCDNQ9UBB6 729 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 SIX4Q9UIU6 781 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 SMG5Q9UPR3 1016 aaKnown RBP8.64□□□□□ -1.03
TRAF3-205ENST00000558700 SNX9Q9Y5X1 595 aa8.64□□□□□ -1.03
TRAF3-205ENST00000558700 PTPRJQ12913 1337 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 SPTBN4Q9H254 2564 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 GREB1Q4ZG55 1949 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 MYBPHLA2RUH7 354 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 SPECC1L-ADORA2AF8WAN1 911 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 ADH1BP00325 375 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 ZSCAN22P10073 491 aaPredicted RBP8.63□□□□□ -1.03
TRAF3-205ENST00000558700 ACAT1P24752 427 aaKnown RBP8.63□□□□□ -1.03
TRAF3-205ENST00000558700 MAGEA11P43364 429 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 ID4P47928 161 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 CDR1P51861 262 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 SNRPFP62306 86 aaKnown RBP8.63□□□□□ -1.03
TRAF3-205ENST00000558700 FZD5Q13467 585 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 MAPRE1Q15691 268 aaKnown RBP8.63□□□□□ -1.03
TRAF3-205ENST00000558700 SNRNP35Q16560 246 aaKnown RBP8.63□□□□□ -1.03
TRAF3-205ENST00000558700 DUOXA2Q1HG44 320 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 ITPRIPL2Q3MIP1 535 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 CFAP221Q4G0U5 840 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 LMBRD2Q68DH5 695 aaPredicted RBP8.63□□□□□ -1.03
TRAF3-205ENST00000558700 SHC4Q6S5L8 630 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 C4orf50Q6ZRC1 276 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 DPH6Q7L8W6 267 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 OSTM1Q86WC4 334 aa8.63□□□□□ -1.03
TRAF3-205ENST00000558700 CBWD2Q8IUF1 395 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms