RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 ABCA7Q8IZY2 2146 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 A0A087WV48 116 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 TTC26A0AVF1 554 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 SGK1O00141 431 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 AP5Z1O43299 807 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 DTNBO60941 627 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 CDC45O75419 566 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 TOM1L1O75674 476 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 GJB3O75712 270 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 NFATC1O95644 943 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 CYP11A1P05108 521 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 CLTAP09496 248 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 HAPLN1P10915 354 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-207ENST00000558500 PLA2G2AP14555 144 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 MUTP22033 750 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 PAX3P23760 479 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 GUCY2FP51841 1108 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 PRSS12P56730 875 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 LILRA4P59901 499 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 MCL1Q07820 350 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 SCRN1Q12765 414 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 SMARCB1Q12824 385 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 NOLC1Q14978 699 aaKnown RBP eCLIP7.3□□□□□ -1.24
LRRC28-207ENST00000558500 GAB4Q2WGN9 574 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 SLCO6A1Q86UG4 719 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 LRRTM3Q86VH5 581 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 NAXDQ8IW45 347 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 SCUBE3Q8IX30 993 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 EFCAB13Q8IY85 973 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 DAW1Q8N136 415 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 ALLCQ8N6M5 410 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 IL17RCQ8NAC3 791 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 TXNDC5Q8NBS9 432 aaKnown RBP7.3□□□□□ -1.24
LRRC28-207ENST00000558500 TTC16Q8NEE8 873 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 HMGB4Q8WW32 186 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 SLC22A12Q96S37 553 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 CYP2S1Q96SQ9 504 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 BHMT2Q9H2M3 363 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 LINC00597Q9H2U6 94 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 TMEM206Q9H813 350 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 BRMS1Q9HCU9 246 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 POLMQ9NP87 494 aaPredicted RBP7.3□□□□□ -1.24
LRRC28-207ENST00000558500 KMT5AQ9NQR1 393 aa7.3□□□□□ -1.24
LRRC28-207ENST00000558500 BCCIPQ9P287 314 aaKnown RBP eCLIP7.3□□□□□ -1.24
LRRC28-207ENST00000558500 APOBEC2Q9Y235 224 aaKnown RBP7.3□□□□□ -1.24
LRRC28-207ENST00000558500 EML5Q05BV3 1969 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 ATXN7O15265 892 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-207ENST00000558500 XPOTO43592 962 aaKnown RBP7.29□□□□□ -1.24
LRRC28-207ENST00000558500 CBFA2T3O75081 653 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 HIP1RO75146 1068 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 TADA3O75528 432 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 KLF8O95600 359 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-207ENST00000558500 CKMP06732 381 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 SYPP08247 313 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 USP17L7P0C7H9 530 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 CSH1P0DML2 217 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 CSH2P0DML3 217 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 RPL6Q02878 288 aaKnown RBP7.29□□□□□ -1.24
LRRC28-207ENST00000558500 PPP2R3AQ06190 1150 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 ZNF33AQ06730 810 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 ECM1Q16610 540 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 HSF5Q4G112 596 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-207ENST00000558500 EOGTQ5NDL2 527 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 TMPRSS7Q7RTY8 843 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 GLRX5Q86SX6 157 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 ZNF605Q86T29 641 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 PGBD3Q8N328 593 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 DEFB119Q8N690 84 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 SH3RF2Q8TEC5 729 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 POM121Q96HA1 1249 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 TRPC7Q9HCX4 862 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 ABI2Q9NYB9 513 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-207ENST00000558500 KIAA1522Q9P206 1035 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-207ENST00000558500 KIAA1468Q9P260 1216 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 DSEQ9UL01 958 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 MAGED2Q9UNF1 606 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-207ENST00000558500 PCDHB5Q9Y5E4 795 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 RAI2Q9Y5P3 530 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 CYP46A1Q9Y6A2 500 aa7.29□□□□□ -1.24
LRRC28-207ENST00000558500 NUP210Q8TEM1 1887 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-207ENST00000558500 KIF26AQ9ULI4 1882 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-207ENST00000558500 TRAV19A0A0A6YYK7 116 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 A0A1W2PQD8 194 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 TCRBV21S2A2A0A5A6 115 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 GOLGA8CPA6NN73 597 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 LACTBL1A8MY62 500 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 BTBD18B2RXH4 712 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 PIRO00625 290 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 SLC16A4O15374 487 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 CLDN3O15551 220 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 ADAM23O75077 832 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 NOL4O94818 638 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 CTDNEP1O95476 244 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 TCF3P15923 654 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 MCM7P33993 719 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 CCT6AP40227 531 aaKnown RBP7.28□□□□□ -1.24
LRRC28-207ENST00000558500 TNFSF9P41273 254 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 KIR2DL1P43626 348 aaPredicted RBP7.28□□□□□ -1.24
LRRC28-207ENST00000558500 ABCG1P45844 678 aa7.28□□□□□ -1.24
LRRC28-207ENST00000558500 GPR15P49685 360 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms