RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CD96P40200 585 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 MLH1P40692 756 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 VIPR2P41587 438 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 KIR2DL3P43628 341 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 PTDSS1P48651 473 aaKnown RBP4.21□□□□□ -1.74
TDP1-217ENST00000557782 CCT4P50991 539 aaKnown RBP4.21□□□□□ -1.74
TDP1-217ENST00000557782 MLLT6P55198 1093 aaPredicted RBP4.21□□□□□ -1.74
TDP1-217ENST00000557782 SNX16P57768 344 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 MC1RQ01726 317 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 GPS1Q13098 491 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 MPP3Q13368 585 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 ACVR2BQ13705 512 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 BECN1Q14457 450 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 SEC23BQ15437 767 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 PLEKHN1Q494U1 663 aaPredicted RBP4.21□□□□□ -1.74
TDP1-217ENST00000557782 TRIM60Q495X7 471 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 CRB2Q5IJ48 1285 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 FAM47AQ5JRC9 791 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 PHF19Q5T6S3 580 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 FAM160B1Q5W0V3 765 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 FCRL6Q6DN72 434 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 MFSD5Q6N075 450 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 ATF7IPQ6VMQ6 1270 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 SYT13Q7L8C5 426 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 CLEC14AQ86T13 490 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 GAS2L3Q86XJ1 694 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 DIS3L2Q8IYB7 885 aaKnown RBP4.21□□□□□ -1.74
TDP1-217ENST00000557782 RTKN2Q8IZC4 609 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 FAM46DQ8NEK8 389 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 DNERQ8NFT8 737 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 ATRIPQ8WXE1 791 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 TBC1D5Q92609 795 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 LPPQ93052 612 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 CALML4Q96GE6 196 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 FEM1CQ96JP0 617 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 CNDP2Q96KP4 475 aaKnown RBP4.21□□□□□ -1.74
TDP1-217ENST00000557782 CLIC6Q96NY7 704 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 MED15Q96RN5 788 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 ADPGKQ9BRR6 497 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 KIAA1683Q9H0B3 1180 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 SLC25A32Q9H2D1 315 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 NELFAQ9H3P2 528 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 C19orf44Q9H6X5 657 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 DKK4Q9UBT3 224 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 RPS6KA6Q9UK32 745 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 CDC42EP3Q9UKI2 254 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 NFU1Q9UMS0 254 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 HCFC2Q9Y5Z7 792 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 PASKQ96RG2 1323 aa4.21□□□□□ -1.74
TDP1-217ENST00000557782 ATRNL1Q5VV63 1379 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 PNMA6EA0A0J9YXQ4 647 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 TCRBV7S2A1N4TA0A589 114 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 OR2W5A6NFC9 320 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 H3BNC9 293 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 J3KTA2 159 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 TSPAN4O14817 238 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 CLGNO14967 610 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 CYP7B1O75881 506 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 F9P00740 461 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 HMGCRP04035 888 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 PROCP04070 461 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 CHGBP05060 677 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 CLEC3BP05452 202 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 TGFB3P10600 412 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 CYP2C8P10632 490 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 FSTP19883 344 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 IL11P20809 199 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 MEOX1P50221 254 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 KCNQ1P51787 676 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 RARSP54136 660 aaKnown RBP4.2□□□□□ -1.74
TDP1-217ENST00000557782 CREB5Q02930 508 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 BNIP3Q12983 259 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 ATP1A4Q13733 1029 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 DCTN1Q14203 1278 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 NFIXQ14938 502 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 EIF4HQ15056 248 aaKnown RBP4.2□□□□□ -1.74
TDP1-217ENST00000557782 RASA2Q15283 850 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 NPY5RQ15761 445 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 TBCEQ15813 527 aaPredicted RBP4.2□□□□□ -1.74
TDP1-217ENST00000557782 MGAT5BQ3V5L5 792 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 TIGD5Q53EQ6 642 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 PLA1AQ53H76 456 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 ADGRF1Q5T601 910 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 FAM69AQ5T7M9 428 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 CACHD1Q5VU97 1274 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 LRCH2Q5VUJ6 765 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 KRT40Q6A162 431 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 KDELC2Q7Z4H8 507 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 PXKQ7Z7A4 578 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 PRPF39Q86UA1 669 aaKnown RBP4.2□□□□□ -1.74
TDP1-217ENST00000557782 GALNT13Q8IUC8 556 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 TAGAPQ8N103 731 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 CPA5Q8WXQ8 436 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 MYLIPQ8WY64 445 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 GCDHQ92947 438 aaPredicted RBP4.2□□□□□ -1.74
TDP1-217ENST00000557782 SHISA4Q96DD7 197 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 APOPT1Q96IL0 206 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 MYOCQ99972 504 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 FUZQ9BT04 418 aa4.2□□□□□ -1.74
TDP1-217ENST00000557782 NDC1Q9BTX1 674 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms