RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 DUSP4Q13115 394 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 PLD1Q13393 1074 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 SLC10A6Q3KNW5 377 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 ITPRIPL2Q3MIP1 535 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 PLK5Q496M5 336 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 ARHGAP29Q52LW3 1261 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 SEZ6Q53EL9 994 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 GPR158Q5T848 1215 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 RNF43Q68DV7 783 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 FSTL4Q6MZW2 842 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 MPZL3Q6UWV2 235 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 HAUS6Q7Z4H7 955 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 NECAB1Q8N987 351 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 ATAD1Q8NBU5 361 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 RNF217Q8TC41 542 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 PSMG2Q969U7 264 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 CHFRQ96EP1 664 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 ZC3H10Q96K80 434 aaKnown RBP6.36□□□□□ -1.39
VPS33B-207ENST00000557470 ACAP3Q96P50 834 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 TMEM209Q96SK2 561 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 TCHPQ9BT92 498 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 EDEM2Q9BV94 578 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 SMG9Q9H0W8 520 aaKnown RBP6.36□□□□□ -1.39
VPS33B-207ENST00000557470 ATXN3LQ9H3M9 355 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 POLMQ9NP87 494 aaPredicted RBP6.36□□□□□ -1.39
VPS33B-207ENST00000557470 OBP2AQ9NY56 170 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 ARHGAP28Q9P2N2 729 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 PCDHGA5Q9Y5G8 931 aa6.36□□□□□ -1.39
VPS33B-207ENST00000557470 CCDC163A0A0D9SF12 145 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 MTMR11A4FU01 709 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 OTOL1A6NHN0 477 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 OR6C75A6NL08 312 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 DCLK1O15075 740 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 EPB41L2O43491 1005 aaKnown RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 CREB3O43889 395 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 JAK2O60674 1132 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 HIP1RO75146 1068 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 AKAP3O75969 853 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 LARGE1O95461 756 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 TOP3BO95985 862 aaKnown RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 S100BP04271 92 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 OR52Z1P0C646 297 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 CXCL8P10145 99 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 GABRR2P28476 465 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 CCT6AP40227 531 aaKnown RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 PTGIRP43119 386 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 AARSP49588 968 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 MCM2P49736 904 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 CDR1P51861 262 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 PEX3P56589 373 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 SPAG1Q07617 926 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 ZNF252P-AS1Q0IIN9 211 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 GRSF1Q12849 480 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 GPR17Q13304 367 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 DMP1Q13316 513 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 NOLC1Q14978 699 aaKnown RBP eCLIP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 MAP7D1Q3KQU3 841 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 ARHGAP15Q53QZ3 475 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 TMEM196Q5HYL7 178 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 HAUS3Q68CZ6 603 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 CENPPQ6IPU0 288 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 DNAJB7Q7Z6W7 309 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 DAW1Q8N136 415 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 NSUN7Q8NE18 718 aaKnown RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 BPIFB1Q8TDL5 484 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 ZBTB45Q96K62 511 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 HHIPQ96QV1 700 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 SPOCK3Q9BQ16 436 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 LPIN3Q9BQK8 851 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 RUSC1Q9BVN2 902 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 DUSP15Q9H1R2 295 aaPredicted RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 HPS4Q9NQG7 708 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 VPS45Q9NRW7 570 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 DDX19AQ9NUU7 478 aaKnown RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 ANKFY1Q9P2R3 1169 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 G3BP2Q9UN86 482 aaKnown RBP6.35□□□□□ -1.39
VPS33B-207ENST00000557470 SLC8A2Q9UPR5 921 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 KIAA1024Q9UPX6 916 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 WASF3Q9UPY6 502 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 ASB3Q9Y575 518 aa6.35□□□□□ -1.39
VPS33B-207ENST00000557470 NUP210Q8TEM1 1887 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 FREM2Q5SZK8 3169 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 CITO14578 2027 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 LNP1A1A4G5 178 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 BCLAF3A2AJT9 711 aaKnown RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 SLC35F4A4IF30 521 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 C4orf47A7E2U8 309 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 TRDMT1O14717 391 aaKnown RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 PPEF2O14830 753 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 PPP1R12AO14974 1030 aaPredicted RBP6.34□□□□□ -1.39
VPS33B-207ENST00000557470 SLC16A4O15374 487 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 NDUFB5O43674 189 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 ATG13O75143 517 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 TOM1L1O75674 476 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 FAM13AO94988 1023 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 FGF19O95750 216 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 CAVIN2O95810 425 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 EGFP01133 1207 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 MUTP22033 750 aa6.34□□□□□ -1.39
VPS33B-207ENST00000557470 U2AF2P26368 475 aaKnown RBP eCLIP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms