RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 RIBC1Q8N443 379 aaPredicted RBP18.59■□□□□ 0.57
XRCC3-218ENST00000557439 CCHCR1Q8TD31 782 aa18.59■□□□□ 0.57
XRCC3-218ENST00000557439 PEBP4Q96S96 227 aa18.59■□□□□ 0.57
XRCC3-218ENST00000557439 UBN1Q9NPG3 1134 aa18.59■□□□□ 0.57
XRCC3-218ENST00000557439 ARHGEF3Q9NR81 526 aa18.59■□□□□ 0.57
XRCC3-218ENST00000557439 DDX56Q9NY93 547 aaKnown RBP18.59■□□□□ 0.57
XRCC3-218ENST00000557439 SLC17A7Q9P2U7 560 aa18.59■□□□□ 0.57
XRCC3-218ENST00000557439 PCDHGC3Q9UN70 934 aa18.59■□□□□ 0.57
XRCC3-218ENST00000557439 SHOC2Q9UQ13 582 aa18.59■□□□□ 0.57
XRCC3-218ENST00000557439 SIGLEC16A6NMB1 481 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 AVILO75366 819 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 USP2O75604 605 aaPredicted RBP18.58■□□□□ 0.57
XRCC3-218ENST00000557439 TNNC2P02585 160 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 ITGB3P05106 788 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 EZRP15311 586 aaKnown RBP18.58■□□□□ 0.57
XRCC3-218ENST00000557439 MIPP30301 263 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 CDH5P33151 784 aaPredicted RBP18.58■□□□□ 0.57
XRCC3-218ENST00000557439 MSH2P43246 934 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 EFNA5P52803 228 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 GJC2Q5T442 439 aaPredicted RBP18.58■□□□□ 0.57
XRCC3-218ENST00000557439 HHATQ5VTY9 493 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 IER5Q5VY09 327 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 RNF43Q68DV7 783 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 CDCA2Q69YH5 1023 aaPredicted RBP18.58■□□□□ 0.57
XRCC3-218ENST00000557439 METTL7BQ6UX53 244 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 XYLT1Q86Y38 959 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 NIPA2Q8N8Q9 360 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 NAT8LQ8N9F0 302 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 C1orf127Q8N9H9 656 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 KCTD6Q8NC69 237 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 N4BP2L2Q92802 583 aaPredicted RBP18.58■□□□□ 0.57
XRCC3-218ENST00000557439 PAFAH2Q99487 392 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 FOXP3Q9BZS1 431 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 ELOVL4Q9GZR5 314 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 PSMC3IPQ9P2W1 217 aaPredicted RBP18.58■□□□□ 0.57
XRCC3-218ENST00000557439 RGS17Q9UGC6 210 aaPredicted RBP18.58■□□□□ 0.57
XRCC3-218ENST00000557439 SNCAIPQ9Y6H5 919 aa18.58■□□□□ 0.57
XRCC3-218ENST00000557439 ANK1P16157 1881 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 FZD9O00144 591 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 GPR25O00155 361 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 NOP56O00567 594 aaKnown RBP18.58■□□□□ 0.56
XRCC3-218ENST00000557439 ECM2O94769 699 aaPredicted RBP18.58■□□□□ 0.56
XRCC3-218ENST00000557439 NEDD9Q14511 834 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 MPZL3Q6UWV2 235 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 VSIG1Q86XK7 387 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.58■□□□□ 0.56
XRCC3-218ENST00000557439 LRRC8CQ8TDW0 803 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 ANKRD36BP1Q96IX9 119 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 GPR20Q99678 358 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 TACO1Q9BSH4 297 aaKnown RBP18.58■□□□□ 0.56
XRCC3-218ENST00000557439 SPATC1LQ9H0A9 340 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 CDT1Q9H211 546 aa18.58■□□□□ 0.56
XRCC3-218ENST00000557439 PRPF4O43172 522 aaKnown RBP eCLIP18.57■□□□□ 0.562e-9■■■■■ 39.8
XRCC3-218ENST00000557439 CBX6O95503 412 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 SLC8A1P32418 973 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 MOGSQ13724 837 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 C15orf59Q2T9L4 293 aaPredicted RBP18.57■□□□□ 0.56
XRCC3-218ENST00000557439 OTOAQ7RTW8 1153 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 TDRPQ86YL5 185 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 SLC4A11Q8NBS3 891 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 GIMAP7Q8NHV1 300 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 ZNF518BQ9C0D4 1074 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 NPHS2Q9NP85 383 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 XPO7Q9UIA9 1087 aaKnown RBP18.57■□□□□ 0.56
XRCC3-218ENST00000557439 EDF1O60869 148 aaKnown RBP18.57■□□□□ 0.56
XRCC3-218ENST00000557439 EDNRBP24530 442 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 GEMIN4P57678 1058 aaKnown RBP18.57■□□□□ 0.56
XRCC3-218ENST00000557439 EIF3EP60228 445 aaKnown RBP18.57■□□□□ 0.56
XRCC3-218ENST00000557439 PDK4Q16654 411 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 ZNF667Q5HYK9 610 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 EFHC2Q5JST6 749 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 WDR78Q5VTH9 848 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 TRNP1Q6NT89 227 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 PPIL6Q8IXY8 311 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 GBP7Q8N8V2 638 aaPredicted RBP18.57■□□□□ 0.56
XRCC3-218ENST00000557439 KCNN1Q92952 543 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 CPB2Q96IY4 423 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 DCTN4Q9UJW0 460 aa18.57■□□□□ 0.56
XRCC3-218ENST00000557439 LACTBL1A8MY62 500 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 M0QYV0 167 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 MICAL2O94851 1124 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 UNC5CO95185 931 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 ANP32DO95626 131 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 RBP3P10745 1247 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 CDC25CP30307 473 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 AP3M2P53677 418 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 YWHAEP62258 255 aaKnown RBP18.56■□□□□ 0.56
XRCC3-218ENST00000557439 PLEKHG4Q58EX7 1191 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 FAXCQ5TGI0 409 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 JADE1Q6IE81 842 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 BBS12Q6ZW61 710 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 APOBEC3FQ8IUX4 373 aaKnown RBP18.56■□□□□ 0.56
XRCC3-218ENST00000557439 TCP10LQ8TDR4 215 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 ZNF75CPQ92670 426 aaPredicted RBP18.56■□□□□ 0.56
XRCC3-218ENST00000557439 PTPRHQ9HD43 1115 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 PDGFCQ9NRA1 345 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 GPATCH2LQ9NWQ4 482 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 SOCS7O14512 581 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 PTPN7P35236 360 aa18.56■□□□□ 0.56
XRCC3-218ENST00000557439 FAM102AQ5T9C2 384 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms