RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PCSK1NQ9UHG2 260 aa11.94□□□□□ -0.5
SRP54-213ENST00000556994 SIGLEC16A6NMB1 481 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 E5RJQ4 531 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 TM9SF1O15321 606 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 AVILO75366 819 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 LMNAP02545 664 aaKnown RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 PSAPP07602 524 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 MYL2P10916 166 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 ESRRAP11474 423 aaPredicted RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 KCNA2P16389 499 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 TBXAS1P24557 533 aaPredicted RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 PSMA2P25787 234 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 ELK3P41970 407 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 MRPS35P82673 323 aaKnown RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 PTK7Q13308 1070 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 RCN2Q14257 317 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 PIGHQ14442 188 aaPredicted RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 EMC2Q15006 297 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 RASA2Q15283 850 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 KLHL38Q2WGJ6 581 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 MDH1BQ5I0G3 518 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 LRRC38Q5VT99 294 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 RNF220Q5VTB9 566 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 PCGF5Q86SE9 256 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 ALYREFQ86V81 257 aaKnown RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 VSIG10LQ86VR7 867 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 EMC1Q8N766 993 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 SSU72Q9NP77 194 aaKnown RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 CNTN6Q9UQ52 1028 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 PLSCR1O15162 318 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 WDR46O15213 610 aaKnown RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 PSMG1O95456 288 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 DLDP09622 509 aaKnown RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 HIRAP54198 1017 aaPredicted RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 MYL6P60660 151 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 ACTR2P61160 394 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 CDK16Q00536 496 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 GHRHRQ02643 423 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 KBTBD12Q3ZCT8 623 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 SPDYAQ5MJ70 313 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 ZBTB33Q86T24 672 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 FBXO27Q8NI29 283 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 DEPTORQ8TB45 409 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 ZNF398Q8TD17 642 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 SKA1Q96BD8 255 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 FAM136AQ96C01 138 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 CGRRF1Q99675 332 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 MECRQ9BV79 373 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 PPP1R12CQ9BZL4 782 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 PPCSQ9HAB8 311 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 DDX56Q9NY93 547 aaKnown RBP11.93□□□□□ -0.5
SRP54-213ENST00000556994 CNTNAP2Q9UHC6 1331 aa11.93□□□□□ -0.5
SRP54-213ENST00000556994 TBC1D12O60347 775 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 LRCH4O75427 683 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 CCND2P30279 289 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 ZNF132P52740 706 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 THOC5Q13769 683 aaKnown RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 PRKD1Q15139 912 aaPredicted RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 PPP1R15BQ5SWA1 713 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 CDHR3Q6ZTQ4 885 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 ZC3H18Q86VM9 953 aaKnown RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 PDIK1LQ8N165 341 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 TMEM35BQ8NCS4 154 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 PHC3Q8NDX5 983 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 SH3TC2Q8TF17 1288 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 ZNF526Q8TF50 670 aaPredicted RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 TSC22D3Q99576 134 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 IMPG2Q9BZV3 1241 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 MTMR12Q9C0I1 747 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 ZNF395Q9H8N7 513 aaPredicted RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 JPH1Q9HDC5 661 aaPredicted RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 CISHQ9NSE2 258 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 SLC9A2Q9UBY0 812 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 STYXL1Q9Y6J8 313 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 WASF2Q9Y6W5 498 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 KIAA1217Q5T5P2 1943 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 TCRBV9S1A1TA0A576 114 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 KBTBD13C9JR72 458 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 FCHO1O14526 889 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 AMPD1P23109 780 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 SP100P23497 879 aaPredicted RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 KDELR1P24390 212 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 HSPA1LP34931 641 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 ETV4P43268 484 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 YWHAGP61981 247 aaKnown RBP eCLIP11.92□□□□□ -0.5
SRP54-213ENST00000556994 SLC25A11Q02978 314 aaKnown RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 ORC1Q13415 861 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 DENND1BQ6P3S1 775 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 NPNTQ6UXI9 565 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 LRRC74BQ6ZQY2 392 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 PRPF39Q86UA1 669 aaKnown RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 RFX6Q8HWS3 928 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 PDCD7Q8N8D1 485 aaKnown RBP11.92□□□□□ -0.5
SRP54-213ENST00000556994 TEKT4Q8WW24 435 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 HSPH1Q92598 858 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 ATG4CQ96DT6 458 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 NMUR2Q9GZQ4 415 aa11.92□□□□□ -0.5
SRP54-213ENST00000556994 RNF146Q9NTX7 359 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms