RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 AP3B2Q13367 1082 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 CLCA4Q14CN2 919 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 KCNT1Q5JUK3 1230 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 CENPPQ6IPU0 288 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 MAMDC2Q7Z304 686 aaPredicted RBP13.24□□□□□ -0.29
ABCD4-226ENST00000556971 ATCAYQ86WG3 371 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 EID2Q8N6I1 236 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 GJA10Q969M2 543 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 MIB2Q96AX9 1013 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 CCDC97Q96F63 343 aaPredicted RBP13.24□□□□□ -0.29
ABCD4-226ENST00000556971 PNKPQ96T60 521 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 DHX33Q9H6R0 707 aaKnown RBP13.24□□□□□ -0.29
ABCD4-226ENST00000556971 GEMIN8Q9NWZ8 242 aaKnown RBP13.24□□□□□ -0.29
ABCD4-226ENST00000556971 NUB1Q9Y5A7 615 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 APCP25054 2843 aa13.24□□□□□ -0.29
ABCD4-226ENST00000556971 MTMR11A4FU01 709 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 MYMKA6NI61 221 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 DDX6P26196 483 aaKnown RBP eCLIP13.23□□□□□ -0.29
ABCD4-226ENST00000556971 CDR1P51861 262 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 NAPAP54920 295 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 FAM160A1Q05DH4 1040 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 ILKQ13418 452 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 VEPH1Q14D04 833 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 EMC2Q15006 297 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 TBR1Q16650 682 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 WWC2Q6AWC2 1192 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 MIER3Q7Z3K6 550 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 NOSTRINQ8IVI9 506 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 DDX12PQ92771 950 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 SEPT5Q99719 369 aaPredicted RBP13.23□□□□□ -0.29
ABCD4-226ENST00000556971 ARHGEF4Q9NR80 690 aa13.23□□□□□ -0.29
ABCD4-226ENST00000556971 ARID1BQ8NFD5 2236 aaPredicted RBP13.23□□□□□ -0.29
ABCD4-226ENST00000556971 ASAP2O43150 1006 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 CYP17A1P05093 508 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 CYP3A4P08684 503 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 HOXB4P17483 251 aaPredicted RBP13.22□□□□□ -0.29
ABCD4-226ENST00000556971 ATF6P18850 670 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 SRSF6Q13247 344 aaKnown RBP13.22□□□□□ -0.29
ABCD4-226ENST00000556971 TEAD4Q15561 434 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 TAF12Q16514 161 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 JAKMIP3Q5VZ66 844 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 TRMT11Q7Z4G4 463 aaKnown RBP13.22□□□□□ -0.29
ABCD4-226ENST00000556971 MIB1Q86YT6 1006 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
ABCD4-226ENST00000556971 APPL2Q8NEU8 664 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 CADM4Q8NFZ8 388 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 IPO4Q8TEX9 1081 aaKnown RBP13.22□□□□□ -0.29
ABCD4-226ENST00000556971 GIPC2Q8TF65 315 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 TCP11Q8WWU5 503 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 CRYGNQ8WXF5 182 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 LENG9Q96B70 501 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 CEP170P1Q96L14 293 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 MRGPRX1Q96LB2 322 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 TEKT3Q9BXF9 490 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 KDM4CQ9H3R0 1056 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 CD248Q9HCU0 757 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 WSB2Q9NYS7 404 aaPredicted RBP13.22□□□□□ -0.29
ABCD4-226ENST00000556971 CSMD2Q7Z408 3487 aa13.22□□□□□ -0.29
ABCD4-226ENST00000556971 ERICH2A1L162 156 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 METTL12A8MUP2 240 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 CLDN1O95832 211 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 MCM4P33991 863 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 GRIA2P42262 883 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 NLRP12P59046 1061 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 RESTQ13127 1097 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 CAPSQ13938 189 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 IMMTQ16891 758 aaKnown RBP13.21□□□□□ -0.29
ABCD4-226ENST00000556971 LRCH2Q5VUJ6 765 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 CCDC82Q8N4S0 544 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 SUSD3Q96L08 255 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 LZTS2Q9BRK4 669 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.21□□□□□ -0.29
ABCD4-226ENST00000556971 ANAPC2Q9UJX6 822 aa13.21□□□□□ -0.29
ABCD4-226ENST00000556971 ATXN7L1Q9ULK2 861 aaPredicted RBP13.21□□□□□ -0.29
ABCD4-226ENST00000556971 NUMA1Q14980 2115 aa13.21□□□□□ -0.3
ABCD4-226ENST00000556971 NIPBLQ6KC79 2804 aaeCLIP13.2□□□□□ -0.3
ABCD4-226ENST00000556971 A0A087X0B3 334 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 A0A1B0GTQ1 180 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 MSH4O15457 936 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 RTN2O75298 545 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 SEMA7AO75326 666 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 ITGAVP06756 1048 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 RFC5P40937 340 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 CTSKP43235 329 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 TNFRSF4P43489 277 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 CD97P48960 835 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 CLK2P49760 499 aaKnown RBP13.2□□□□□ -0.3
ABCD4-226ENST00000556971 TFDP1Q14186 410 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 C3orf38Q5JPI3 329 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 PRAMEF14Q5SWL7 426 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 MON1AQ86VX9 555 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 ASAP3Q8TDY4 903 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 SH3RF2Q8TEC5 729 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 MRPS31Q92665 395 aaKnown RBP13.2□□□□□ -0.3
ABCD4-226ENST00000556971 EVI5LQ96CN4 794 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 PDZD7Q9H5P4 517 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 TRPC7Q9HCX4 862 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 TIMM13Q9Y5L4 95 aaPredicted RBP13.2□□□□□ -0.3
ABCD4-226ENST00000556971 RAD54BQ9Y620 910 aa13.2□□□□□ -0.3
ABCD4-226ENST00000556971 PCSK5Q92824 1860 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms