RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 TADA3O75528 432 aa23.08■■□□□ 1.29
SDR39U1-216ENST00000556175 CKMP06732 381 aa23.08■■□□□ 1.29
SDR39U1-216ENST00000556175 ANXA13P27216 316 aa23.08■■□□□ 1.29
SDR39U1-216ENST00000556175 CNR2P34972 360 aa23.08■■□□□ 1.29
SDR39U1-216ENST00000556175 PSMC1P62191 440 aaKnown RBP23.08■■□□□ 1.29
SDR39U1-216ENST00000556175 TNNC1P63316 161 aa23.08■■□□□ 1.29
SDR39U1-216ENST00000556175 GRSF1Q12849 480 aaKnown RBP eCLIP23.08■■□□□ 1.29
SDR39U1-216ENST00000556175 PUM1Q14671 1186 aaKnown RBP eCLIP23.08■■□□□ 1.29
SDR39U1-216ENST00000556175 SNX25Q9H3E2 840 aa23.08■■□□□ 1.29
SDR39U1-216ENST00000556175 HPS4Q9NQG7 708 aa23.08■■□□□ 1.29
SDR39U1-216ENST00000556175 CEP250Q9BV73 2442 aa23.08■■□□□ 1.28
SDR39U1-216ENST00000556175 TRIM66O15016 1216 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 ATP2C2O75185 946 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 TACC1O75410 805 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 SDHBP21912 280 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 LMO2P25791 158 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 CYP27A1Q02318 531 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 TRPC3Q13507 836 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 CCDC142Q17RM4 750 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 KNOP1Q1ED39 458 aaKnown RBP23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 WDR44Q5JSH3 913 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 LAIR1Q6GTX8 287 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 LONP2Q86WA8 852 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 MYCBPAPQ8TBZ2 947 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 EBF3Q9H4W6 596 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 SLC39A2Q9NP94 309 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 CRTAC1Q9NQ79 661 aa23.07■■□□□ 1.28
SDR39U1-216ENST00000556175 EXOC3O60645 756 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 STAU1O95793 577 aaKnown RBP23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 PDGFRBP09619 1106 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 PFKLP17858 780 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 HOXA6P31267 233 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 ATICP31939 592 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 GNL1P36915 607 aaPredicted RBP23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 GRIK1P39086 918 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 AFMP43652 599 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 LMNB2Q03252 620 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 CUL4BQ13620 913 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 KCNB1Q14721 858 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 MTF1Q14872 753 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 TMEM196Q5HYL7 178 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 TRIM68Q6AZZ1 485 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 CPA6Q8N4T0 437 aa23.06■■□□□ 1.28
SDR39U1-216ENST00000556175 K7ESF4 209 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 TRDMT1O14717 391 aaKnown RBP23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 ATG13O75143 517 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 SLFN14P0C7P3 912 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 BDNFP23560 247 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 CASP1P29466 404 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 WDR72Q3MJ13 1102 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 PRR23BQ6ZRT6 265 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 DENND5BQ6ZUT9 1274 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 DGLUCYQ7Z3D6 616 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 OR6B3Q8NGW1 331 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 OSCP1Q8WVF1 389 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 SYAP1Q96A49 352 aaPredicted RBP23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 PCED1BQ96HM7 432 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 RCOR1Q9UKL0 485 aa23.05■■□□□ 1.28
SDR39U1-216ENST00000556175 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 PRR5-ARHGAP8B1AHC4 643 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 CHURC1-FNTBB4DL54 471 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 CST3P01034 146 aaPredicted RBP23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 PPP3CCP48454 512 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 IFNAR2P48551 515 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 FNTBP49356 437 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 AP3M2P53677 418 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 ARHGAP8P85298 464 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 DNM1Q05193 864 aaKnown RBP23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 USP4Q13107 963 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 SIM2Q14190 667 aaPredicted RBP23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 ZNF77Q15935 545 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 MDH1BQ5I0G3 518 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 ATP2A3Q93084 1043 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 MRPL45Q9BRJ2 306 aaKnown RBP23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 EXOC1Q9NV70 894 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 DUS2Q9NX74 493 aaKnown RBP23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 DLL3Q9NYJ7 618 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 TRPM5Q9NZQ8 1165 aa23.04■■□□□ 1.28
SDR39U1-216ENST00000556175 PHACTR2O75167 634 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 ARSAP15289 507 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 TCF3P15923 654 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 HDCP19113 662 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 DRD1P21728 446 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 PSMD2Q13200 908 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 FSTL4Q6MZW2 842 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 RIN3Q8TB24 985 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 C8orf48Q96LL4 319 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 CYP2S1Q96SQ9 504 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 ELOVL4Q9GZR5 314 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 GCNT4Q9P109 453 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 USP25Q9UHP3 1055 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 USP18Q9UMW8 372 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 ARHGAP26Q9UNA1 814 aa23.03■■□□□ 1.28
SDR39U1-216ENST00000556175 PTPRDP23468 1912 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 DNAH14Q0VDD8 3507 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 OTOL1A6NHN0 477 aaPredicted RBP23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 LRP3O75074 770 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 MYL1P05976 194 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 RETP07949 1114 aa23.02■■□□□ 1.28
SDR39U1-216ENST00000556175 NOP14P78316 857 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms