RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 TMEM191CA6NGB0 347 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 TMEM88BA6NKF7 163 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 CILPO75339 1184 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 CSDE1O75534 798 aaKnown RBP8.79□□□□□ -1
ATXN3-235ENST00000556082 FGGP02679 453 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 ITGB3P05106 788 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 GLI1P08151 1106 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 MYL3P08590 195 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 WEE2P0C1S8 567 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 FAM163BP0C2L3 166 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 FAM157BP0CG42 384 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 SKIP12755 728 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 CYBAP13498 195 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 KCNE1P15382 129 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 AMPD1P23109 780 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 CTGFP29279 349 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 AARSP49588 968 aaKnown RBP eCLIP8.79□□□□□ -1
ATXN3-235ENST00000556082 DNA2P51530 1060 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 RAD23BP54727 409 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 EPHB4P54760 987 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 DRG2P55039 364 aaKnown RBP8.79□□□□□ -1
ATXN3-235ENST00000556082 GSCP56915 257 aaPredicted RBP8.79□□□□□ -1
ATXN3-235ENST00000556082 MYO1EQ12965 1108 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 PAK2Q13177 524 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 GPS2Q13227 327 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 SMC1AQ14683 1233 aaKnown RBP8.79□□□□□ -1
ATXN3-235ENST00000556082 SNX17Q15036 470 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 CNGA2Q16280 664 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 WDR72Q3MJ13 1102 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 LRRC38Q5VT99 294 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 RUFY4Q6ZNE9 571 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 MMS22LQ6ZRQ5 1243 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 CATSPER4Q7RTX7 472 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 MREGQ8N565 214 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 WDTC1Q8N5D0 677 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 LRRC52Q8N7C0 313 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 SMC1BQ8NDV3 1235 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 TRPV1Q8NER1 839 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 FEZF2Q8TBJ5 459 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 TFAP2BQ92481 460 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 KRT35Q92764 455 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 SNX27Q96L92 541 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 FAM49AQ9H0Q0 323 aaPredicted RBP8.79□□□□□ -1
ATXN3-235ENST00000556082 SCHIP1Q9P0W5 487 aaPredicted RBP8.79□□□□□ -1
ATXN3-235ENST00000556082 CNTN3Q9P232 1028 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 IP6K2Q9UHH9 426 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 ANAPC7Q9UJX3 599 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 STRIP2Q9ULQ0 834 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.79□□□□□ -1
ATXN3-235ENST00000556082 CEP83Q9Y592 693 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.79□□□□□ -1
ATXN3-235ENST00000556082 ZSWIM8A7E2V4 1837 aa8.79□□□□□ -1
ATXN3-235ENST00000556082 GNB5O14775 395 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 FSCN2O14926 492 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 TREHO43280 583 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 RAD51CO43502 376 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 PSTPIP1O43586 416 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 SPOPO43791 374 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 HEXIM1O94992 359 aaKnown RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 NPTXRO95502 500 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 CALCAP01258 141 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 CD4P01730 458 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 HMGCRP04035 888 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 KRT19P08727 400 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 PYGMP11217 842 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 VDRP11473 427 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 ITGA4P13612 1032 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 CYP3A5P20815 502 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 ADH6P28332 368 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 POLR2BP30876 1174 aaKnown RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 CHRNA3P32297 505 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 PSMC4P43686 418 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 YARSP54577 528 aaKnown RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 RNASE9P60153 205 aaKnown RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 LACTBP83111 547 aaPredicted RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 SLC7A5Q01650 507 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 GUCY2DQ02846 1103 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 DHX34Q14147 1143 aaKnown RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 STILQ15468 1287 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 ALS2CLQ60I27 953 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 LINC00114Q6XXX2 140 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 SESTD1Q86VW0 696 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 SLC13A5Q86YT5 568 aaPredicted RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 C7orf31Q8N865 590 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 NIPA2Q8N8Q9 360 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 C12orf50Q8NA57 414 aaPredicted RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 SLC4A11Q8NBS3 891 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 MAIP1Q8WWC4 291 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 DNAJB3Q8WWF6 145 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 TMEM176AQ96HP8 235 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 PKNOX2Q96KN3 472 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 ZIC5Q96T25 663 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 AP1M1Q9BXS5 423 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 SDCBP2Q9H190 292 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 SPC25Q9HBM1 224 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 EPB41L5Q9HCM4 733 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 MED4Q9NPJ6 270 aa8.78□□□□□ -1
ATXN3-235ENST00000556082 NOP53Q9NZM5 478 aaKnown RBP8.78□□□□□ -1
ATXN3-235ENST00000556082 WDR35Q9P2L0 1181 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms