RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 NRDE2Q9H7Z3 1164 aa4.66□□□□□ -1.66
FOXN3-210ENST00000555658 C6orf50Q9HD87 102 aa4.66□□□□□ -1.66
FOXN3-210ENST00000555658 SH3GLB2Q9NR46 395 aa4.66□□□□□ -1.66
FOXN3-210ENST00000555658 TMOD4Q9NZQ9 345 aa4.66□□□□□ -1.66
FOXN3-210ENST00000555658 FEM1BQ9UK73 627 aa4.66□□□□□ -1.66
FOXN3-210ENST00000555658 CFAP45Q9UL16 551 aa4.66□□□□□ -1.66
FOXN3-210ENST00000555658 FRMPD2Q68DX3 1309 aaPredicted RBP4.66□□□□□ -1.66
FOXN3-210ENST00000555658 SCN9AQ15858 1988 aa4.65□□□□□ -1.66
FOXN3-210ENST00000555658 CCDC163A0A0D9SF12 145 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 hCG_1642624A0A1W2PR95 340 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 TRIM75PA6NK02 468 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 RASSF10A6NK89 507 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 GOLGA6L6A8MZA4 724 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 TRAF5O00463 557 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 ZBTB5O15062 677 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 WDR46O15213 610 aaKnown RBP4.65□□□□□ -1.67
FOXN3-210ENST00000555658 DAPK3O43293 454 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 PLA2G6O60733 806 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 MFAP3LO75121 409 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 BAG4O95429 457 aaKnown RBP4.65□□□□□ -1.67
FOXN3-210ENST00000555658 MMP1P03956 469 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 GNA11P29992 359 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 SLC16A2P36021 539 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 STAT3P40763 770 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 SCNN1GP51170 649 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 STAT2P52630 851 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 MRPL12P52815 198 aaKnown RBP4.65□□□□□ -1.67
FOXN3-210ENST00000555658 NAPAP54920 295 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 BACE1P56817 501 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 KRT85P78386 507 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 SLC6A3Q01959 620 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 GUCY1B3Q02153 619 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 PPATQ06203 517 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 FSTL1Q12841 308 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 VGLL4Q14135 290 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 MYBPC2Q14324 1141 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 TMEM177Q53S58 311 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 CATSPEREQ5SY80 951 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 SYDE2Q5VT97 1194 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 TAF3Q5VWG9 929 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 OTUD7BQ6GQQ9 843 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 LAIR1Q6GTX8 287 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 CC2D1AQ6P1N0 951 aaPredicted RBP4.65□□□□□ -1.67
FOXN3-210ENST00000555658 BTNL9Q6UXG8 535 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 OVCH1Q7RTY7 1134 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 DDX53Q86TM3 631 aaKnown RBP4.65□□□□□ -1.67
FOXN3-210ENST00000555658 ERO1BQ86YB8 467 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 HOMER1Q86YM7 354 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 ADGRF4Q8IZF3 695 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 SDR16C5Q8N3Y7 309 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 OTUD6BQ8N6M0 293 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 IGSF22Q8N9C0 903 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 PRPF38AQ8NAV1 312 aaKnown RBP4.65□□□□□ -1.67
FOXN3-210ENST00000555658 CCDC148Q8NFR7 591 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 BICD2Q8TD16 824 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 HAS1Q92839 578 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 AIFM3Q96NN9 605 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 PIGSQ96S52 555 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 GLT8D2Q9H1C3 349 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 FOXP1Q9H334 677 aaPredicted RBP4.65□□□□□ -1.67
FOXN3-210ENST00000555658 PCIF1Q9H4Z3 704 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 JMJD4Q9H9V9 463 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 NMRK2Q9NPI5 230 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 BARHL2Q9NY43 387 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 VPS54Q9P1Q0 977 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 PNMA2Q9UL42 364 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 CHD4Q14839 1912 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 TIAM2Q8IVF5 1701 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 ARFGEF1Q9Y6D6 1849 aa4.65□□□□□ -1.67
FOXN3-210ENST00000555658 BRCA1P38398 1863 aaKnown RBP4.64□□□□□ -1.67
FOXN3-210ENST00000555658 CCDC88AQ3V6T2 1871 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 MYH2Q9UKX2 1941 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 UBE2QL1A1L167 161 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 GOLGA6L4A6NEF3 574 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 SMCO2A6NFE2 343 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 BTBD18B2RXH4 712 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 UBE2Q2LH0YL09 131 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 CXCL11O14625 94 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 CYTH3O43739 400 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 ZBED4O75132 1171 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 PPFIA4O75335 1185 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 FLOT1O75955 427 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 IPO13O94829 963 aaKnown RBP4.64□□□□□ -1.67
FOXN3-210ENST00000555658 U2AF2P26368 475 aaKnown RBP eCLIP4.64□□□□□ -1.671e-6■■□□□ 14.2
FOXN3-210ENST00000555658 GTF2F1P35269 517 aaKnown RBP eCLIP4.64□□□□□ -1.672e-6■■■□□ 16.6
FOXN3-210ENST00000555658 KRT2P35908 639 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 KIF23Q02241 960 aaPredicted RBP4.64□□□□□ -1.67
FOXN3-210ENST00000555658 KRTAP1-1Q07627 177 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 RESTQ13127 1097 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 COG2Q14746 738 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 SF3A1Q15459 793 aaKnown RBP4.64□□□□□ -1.67
FOXN3-210ENST00000555658 GAGE13Q4V321 117 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 TM4SF20Q53R12 229 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 RILPL1Q5EBL4 403 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 FAM83BQ5T0W9 1011 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 FKBP15Q5T1M5 1219 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 SLFN12LQ6IEE8 588 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 DPY19L2P1Q6NXN4 242 aa4.64□□□□□ -1.67
FOXN3-210ENST00000555658 DLK2Q6UY11 383 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms