RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 GOLGA8DPQ0D2H9 430 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 ADAM15Q13444 863 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 CCDC142Q17RM4 750 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 TCEAL5Q5H9L2 206 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 SPATA31D4Q6ZUB0 917 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 CCDC186Q7Z3E2 898 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 FAM35AQ86V20 835 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 WDTC1Q8N5D0 677 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 DEFB123Q8N688 67 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 EFHBQ8N7U6 833 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 SLC30A5Q8TAD4 765 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 UBA3Q8TBC4 463 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 STK32AQ8WU08 396 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 SLC35F5Q8WV83 523 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 SMARCD1Q96GM5 515 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 PDLIM2Q96JY6 352 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 C8orf48Q96LL4 319 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 KCNK16Q96T55 309 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 GAS2L1Q99501 681 aaPredicted RBP10.8□□□□□ -0.68
SYNE2-215ENST00000554997 CDX2Q99626 313 aaPredicted RBP10.8□□□□□ -0.68
SYNE2-215ENST00000554997 SMOQ99835 787 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 SYT11Q9BT88 431 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 ZNF518BQ9C0D4 1074 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 CRISPLD1Q9H336 500 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 ABI2Q9NYB9 513 aaPredicted RBP10.8□□□□□ -0.68
SYNE2-215ENST00000554997 FBXW11Q9UKB1 542 aa10.8□□□□□ -0.68
SYNE2-215ENST00000554997 MYO9BQ13459 2157 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 SSU72P8A0A1W2PR75 194 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 PRRG1O14668 218 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 TRIM66O15016 1216 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 AP1G2O75843 785 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 BEST1O76090 585 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 MICAL2O94851 1124 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 MMEP08473 750 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 CFHP08603 1231 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 NPR3P17342 541 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 IGFBP4P22692 258 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 ALDH1A3P47895 512 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 CDR1P51861 262 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 FMO1Q01740 532 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 BST2Q10589 180 aaKnown RBP10.79□□□□□ -0.68
SYNE2-215ENST00000554997 HYAL1Q12794 435 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 DDR2Q16832 855 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 GOLGA7BQ2TAP0 167 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 MGAT5BQ3V5L5 792 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 TAF3Q5VWG9 929 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 DENND1BQ6P3S1 775 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 ELMSAN1Q6PJG2 1045 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 TRIM72Q6ZMU5 477 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 CLEC20AQ6ZU45 233 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 Q7L0L9 218 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 ZNF571Q7Z3V5 609 aaPredicted RBP10.79□□□□□ -0.68
SYNE2-215ENST00000554997 TTC30AQ86WT1 665 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 SLC20A1Q8WUM9 679 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 SPATA17Q96L03 361 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 CHP1Q99653 195 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 PDCL3Q9H2J4 239 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 IGFLR1Q9H665 355 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 PNPLA8Q9NP80 782 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 MTMR10Q9NXD2 777 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 ARHGAP20Q9P2F6 1191 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 HCFC2Q9Y5Z7 792 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 CHD9Q3L8U1 2897 aa10.79□□□□□ -0.68
SYNE2-215ENST00000554997 PLXNA4Q9HCM2 1894 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 XPO1O14980 1071 aaKnown RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 ZMYND10O75800 440 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 PAPLNO95428 1278 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 SLC34A2O95436 690 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 LSM8O95777 96 aaKnown RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 CYP1A1P04798 512 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 HNRNPA1P09651 372 aaKnown RBP eCLIP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 SETSIPP0DME0 302 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 GZMAP12544 262 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 EPCAMP16422 314 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 FECHP22830 423 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 ANXA13P27216 316 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 HOXA9P31269 272 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 SSTR3P32745 418 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 CDH5P33151 784 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 GTF2F1P35269 517 aaKnown RBP eCLIP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 RPL34P49207 117 aaKnown RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 CACNA2D1P54289 1103 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 BCAT1P54687 386 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 EPHB3P54753 998 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 MAP3K7CLP57077 242 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 PDE4CQ08493 712 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 CTC1Q2NKJ3 1217 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 ASTE1Q2TB18 679 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 CYP26C1Q6V0L0 522 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 VPS36Q86VN1 386 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 TMTC1Q8IUR5 882 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 SCN4BQ8IWT1 228 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 TTC9BQ8N6N2 239 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 TMEM35BQ8NCS4 154 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 ZMIZ2Q8NF64 920 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 KCTD13Q8WZ19 329 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 SECISBP2LQ93073 1101 aaKnown RBP10.78□□□□□ -0.68
SYNE2-215ENST00000554997 HSFY1Q96LI6 401 aa10.78□□□□□ -0.68
SYNE2-215ENST00000554997 CCDC42Q96M95 316 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms