RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 EPCAMP16422 314 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 NPR3P17342 541 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 BDNFP23560 247 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 CYP2F1P24903 491 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 MYLIPQ8WY64 445 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 DDX1Q92499 740 aaKnown RBP17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 C8orf48Q96LL4 319 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 ZSWIM1Q9BR11 485 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 DUSP16Q9BY84 665 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 UBXN6Q9BZV1 441 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 LHX5Q9H2C1 402 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 MAN1C1Q9NR34 630 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 KRT82Q9NSB4 513 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 ABHD10Q9NUJ1 306 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 ZNHIT6Q9NWK9 470 aaKnown RBP17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 ZDHHC7Q9NXF8 308 aa17.42■□□□□ 0.38
SPTLC2-203ENST00000554901 CLDN5O00501 218 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 ZMYND10O75800 440 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 AP1G2O75843 785 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 C8AP07357 584 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 HNRNPA1P09651 372 aaKnown RBP eCLIP17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 FOSL2P15408 326 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 ADORA2BP29275 332 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 ALDH1A3P47895 512 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 CDR2Q01850 454 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 ARID5AQ03989 594 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 BST2Q10589 180 aaKnown RBP17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 ADAM15Q13444 863 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 CTC1Q2NKJ3 1217 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 GOLGA7BQ2TAP0 167 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 MGAT5BQ3V5L5 792 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 PKDCCQ504Y2 493 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 TRIM72Q6ZMU5 477 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 NOP9Q86U38 636 aaKnown RBP17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 SPATA17Q96L03 361 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 RHOBTB2Q9BYZ6 727 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 CRISPLD1Q9H336 500 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 ACP6Q9NPH0 428 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 YIPF1Q9Y548 306 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 ASB3Q9Y575 518 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 CEP83Q9Y592 693 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 INSL5Q9Y5Q6 135 aa17.41■□□□□ 0.38
SPTLC2-203ENST00000554901 MICAL2O94851 1124 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 LSM8O95777 96 aaKnown RBP17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 SERPING1P05155 500 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 HOXB8P17481 243 aaPredicted RBP17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 ANXA13P27216 316 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 GRIK1P39086 918 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 CDK17Q00537 523 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 KLHL30Q0D2K2 578 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 E4F1Q66K89 784 aaPredicted RBP17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 CYP26C1Q6V0L0 522 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 CLEC20AQ6ZU45 233 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 TTC30AQ86WT1 665 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 TC2NQ8N9U0 490 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 CMASQ8NFW8 434 aaPredicted RBP17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 SLC7A14Q8TBB6 771 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 STK32AQ8WU08 396 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 SEPT5Q99719 369 aaPredicted RBP17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 SLC27A5Q9Y2P5 690 aa17.4■□□□□ 0.38
SPTLC2-203ENST00000554901 M0QYV0 167 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 XPO1O14980 1071 aaKnown RBP17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 LRG1P02750 347 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 SPATA31D3P0C874 917 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 CDH5P33151 784 aaPredicted RBP17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 EPHB3P54753 998 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 ADKP55263 362 aaKnown RBP17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 GSDMDP57764 484 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 VEPH1Q14D04 833 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 PPM1LQ5SGD2 360 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 HGSNATQ68CP4 663 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 SPATA31D4Q6ZUB0 917 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 TTC9BQ8N6N2 239 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 VN1R2Q8NFZ6 395 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 PABPC5Q96DU9 382 aaKnown RBP17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 PANX2Q96RD6 677 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 SYT11Q9BT88 431 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 PDCL3Q9H2J4 239 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 IGFLR1Q9H665 355 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 SFXN1Q9H9B4 322 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 EHD2Q9NZN4 543 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 PLXNA3P51805 1871 aa17.39■□□□□ 0.37
SPTLC2-203ENST00000554901 PTPRDP23468 1912 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 F8VP50 259 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 GLP2RO95838 553 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 GTF2F1P35269 517 aaKnown RBP eCLIP17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 GPD2P43304 727 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 PLA2G4AP47712 749 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 PPP1R2P3Q6NXS1 205 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 LLGL2Q6P1M3 1020 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 ITIH5Q86UX2 942 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 VPS36Q86VN1 386 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 SCN4BQ8IWT1 228 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 TMEM35BQ8NCS4 154 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 SLC35F5Q8WV83 523 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 HSFY1Q96LI6 401 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 SMOQ99835 787 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 AGPAT1Q99943 283 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 HAUS4Q9H6D7 363 aa17.38■□□□□ 0.37
SPTLC2-203ENST00000554901 CYLDQ9NQC7 956 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms