RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 KIF9Q9HAQ2 790 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 CRTAC1Q9NQ79 661 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 TFIP11Q9UBB9 837 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 CDV3Q9UKY7 258 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 THADAQ6YHU6 1953 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 CHD8Q9HCK8 2581 aa13.1□□□□□ -0.31
MTHFD1-207ENST00000554677 C2orf78A6NCI8 922 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 ZNF233A6NK53 670 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 SLC30A4O14863 429 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 KIAA0391O15091 583 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 TGFB1I1O43294 461 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 STX6O43752 255 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 PCSK1P29120 753 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 PXNP49023 591 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 FAM160A1Q05DH4 1040 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 GRSF1Q12849 480 aaKnown RBP eCLIP13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 PDGFRLQ15198 375 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 DUOXA2Q1HG44 320 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 CNNM4Q6P4Q7 775 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 PRR23CQ6ZRP0 262 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 SPATA2LQ8IUW3 424 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 SCN4BQ8IWT1 228 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 ARL14EPQ8N8R7 260 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 ANKRD36BP1Q96IX9 119 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 TNMDQ9H2S6 317 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 LINC00597Q9H2U6 94 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 ECT2Q9H8V3 914 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 HSPBP1Q9NZL4 362 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 UXTQ9UBK9 157 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 CDH9Q9ULB4 789 aa13.09□□□□□ -0.31
MTHFD1-207ENST00000554677 CCDC163A0A0D9SF12 145 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 SPTLC2O15270 562 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 RNF40O75150 1001 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 PDGFRBP09619 1106 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 TCF3P15923 654 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 WARSP23381 471 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 BDNFP23560 247 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 RAP1GAPP47736 663 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 USP46P62068 366 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 EHHADHQ08426 723 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 USP4Q13107 963 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 MTF1Q14872 753 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 EML3Q32P44 896 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 SHC4Q6S5L8 630 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 TRAPPC11Q7Z392 1133 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 NETO1Q8TDF5 533 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 OSCP1Q8WVF1 389 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 GAB3Q8WWW8 586 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 ZNF516Q92618 1163 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 SPATA17Q96L03 361 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 P2RY13Q9BPV8 354 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 C7orf25Q9BPX7 421 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 SYT15Q9BQS2 421 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 TRPC7Q9HCX4 862 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 DUS2Q9NX74 493 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 MAGEC2Q9UBF1 373 aaPredicted RBP13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 WNT6Q9Y6F9 365 aa13.08□□□□□ -0.32
MTHFD1-207ENST00000554677 KMT2BQ9UMN6 2715 aaPredicted RBP13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 TRAV19A0A0A6YYK7 116 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 ANTXRLA6NF34 631 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 AXIN1O15169 862 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 EIF3DO15371 548 aaKnown RBP eCLIP13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 PPP6R2O75170 966 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 TNNC2P02585 160 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 USP17L7P0C7H9 530 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 DRD1P21728 446 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 MYO1EQ12965 1108 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 STK38Q15208 465 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 SURF1Q15526 300 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 GAB4Q2WGN9 574 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 CC2D1AQ6P1N0 951 aaPredicted RBP13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 VSTM1Q6UX27 236 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 CEP68Q76N32 757 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 KBTBD6Q86V97 674 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 WDR49Q8IV35 697 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 SH3RF2Q8TEC5 729 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 SCFD1Q8WVM8 642 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 MYLPFQ96A32 169 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 DHX58Q96C10 678 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 MRPL45Q9BRJ2 306 aaKnown RBP13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 BACH2Q9BYV9 841 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 RNF38Q9H0F5 515 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 AGPAT3Q9NRZ7 376 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 RXFP3Q9NSD7 469 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 TMEM30AQ9NV96 361 aa13.07□□□□□ -0.32
MTHFD1-207ENST00000554677 PCNX2A6NKB5 2137 aa13.06□□□□□ -0.32
MTHFD1-207ENST00000554677 K7ELQ4 463 aaPredicted RBP13.06□□□□□ -0.32
MTHFD1-207ENST00000554677 TM4SF5O14894 197 aa13.06□□□□□ -0.32
MTHFD1-207ENST00000554677 CLIC2O15247 247 aa13.06□□□□□ -0.32
MTHFD1-207ENST00000554677 ATG13O75143 517 aa13.06□□□□□ -0.32
MTHFD1-207ENST00000554677 FAM163BP0C2L3 166 aa13.06□□□□□ -0.32
MTHFD1-207ENST00000554677 HDCP19113 662 aa13.06□□□□□ -0.32
MTHFD1-207ENST00000554677 CASP1P29466 404 aa13.06□□□□□ -0.32
MTHFD1-207ENST00000554677 CACNA2D1P54289 1103 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms