RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 WDR44Q5JSH3 913 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 RESP18Q5W5W9 173 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 TXNDC8Q6A555 127 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 SCARA3Q6AZY7 606 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 LAIR1Q6GTX8 287 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 TSSK4Q6SA08 328 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 TRAPPC11Q7Z392 1133 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 DCLK2Q8N568 766 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 FSIP1Q8NA03 581 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 MYCBPAPQ8TBZ2 947 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 NOC3LQ8WTT2 800 aaKnown RBP7.07□□□□□ -1.28
SLIRP-203ENST00000554074 HPS3Q969F9 1004 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 EXOC4Q96A65 974 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 RMDN1Q96DB5 314 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 ZFYVE19Q96K21 471 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 FNBP1Q96RU3 617 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 CGRRF1Q99675 332 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 TTLL2Q9BWV7 592 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 SMG9Q9H0W8 520 aaKnown RBP7.07□□□□□ -1.28
SLIRP-203ENST00000554074 VRTNQ9H8Y1 702 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 CRTAC1Q9NQ79 661 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 HPS4Q9NQG7 708 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 GKN1Q9NS71 199 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 MAGEC2Q9UBF1 373 aaPredicted RBP7.07□□□□□ -1.28
SLIRP-203ENST00000554074 RCOR1Q9UKL0 485 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 PCDHA7Q9UN72 937 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 CCL26Q9Y258 94 aa7.07□□□□□ -1.28
SLIRP-203ENST00000554074 SPTBN2O15020 2390 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 ABCA7Q8IZY2 2146 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 TRAV19A0A0A6YYK7 116 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 PRR5-ARHGAP8B1AHC4 643 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 CHURC1-FNTBB4DL54 471 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 TRIM66O15016 1216 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 FOXD2O60548 495 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-203ENST00000554074 ATG13O75143 517 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 SLFN14P0C7P3 912 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 DRD1P21728 446 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 TGM1P22735 817 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 LMO2P25791 158 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 ATICP31939 592 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 ME1P48163 572 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 NOP14P78316 857 aaKnown RBP7.06□□□□□ -1.28
SLIRP-203ENST00000554074 CLDN10P78369 228 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 NUCB2P80303 420 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 ARHGAP8P85298 464 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 LMNB2Q03252 620 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 TNK2Q07912 1038 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 GRSF1Q12849 480 aaKnown RBP eCLIP7.06□□□□□ -1.28
SLIRP-203ENST00000554074 PSMD2Q13200 908 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 MTF1Q14872 753 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 PON2Q15165 354 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 ZNF77Q15935 545 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 FBXO43Q4G163 708 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 SDHAF4Q5VUM1 108 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 LMBRD2Q68DH5 695 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-203ENST00000554074 CC2D1AQ6P1N0 951 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-203ENST00000554074 Q6ZS52 159 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 DENND5BQ6ZUT9 1274 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 WDR5BQ86VZ2 330 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 LONP2Q86WA8 852 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 GPIHBP1Q8IV16 184 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 SLC9A9Q8IVB4 645 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 OSCP1Q8WVF1 389 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 ATP2A3Q93084 1043 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 MYLPFQ96A32 169 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 SYAP1Q96A49 352 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-203ENST00000554074 CHFRQ96EP1 664 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 FAM84AQ96KN4 292 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 C8orf48Q96LL4 319 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 GZF1Q9H116 711 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-203ENST00000554074 RBM12Q9NTZ6 932 aaKnown RBP7.06□□□□□ -1.28
SLIRP-203ENST00000554074 GCNT4Q9P109 453 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 USP25Q9UHP3 1055 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 GMEB2Q9UKD1 530 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 RAB23Q9ULC3 237 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 CIZ1Q9ULV3 898 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-203ENST00000554074 ARHGAP26Q9UNA1 814 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 MAGED2Q9UNF1 606 aaPredicted RBP7.06□□□□□ -1.28
SLIRP-203ENST00000554074 ATP6V1DQ9Y5K8 247 aa7.06□□□□□ -1.28
SLIRP-203ENST00000554074 OTOL1A6NHN0 477 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 TULP1O00294 542 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CLIC2O15247 247 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 HCRTO43612 131 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 ACTN4O43707 911 aaKnown RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 KLRC4O43908 158 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 EXOC3O60645 756 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 ATP2C2O75185 946 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 AKAP3O75969 853 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 OLFM2O95897 454 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CST3P01034 146 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CKMP06732 381 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 RETP07949 1114 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 DLATP10515 647 aaKnown RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 HDCP19113 662 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 BDNFP23560 247 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CMA1P23946 247 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 ANXA13P27216 316 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 GNL1P36915 607 aaPredicted RBP7.05□□□□□ -1.28
SLIRP-203ENST00000554074 GRIK1P39086 918 aa7.05□□□□□ -1.28
SLIRP-203ENST00000554074 CYP2J2P51589 502 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms