RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 EXOC3O60645 756 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 TACC1O75410 805 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 PAPSS2O95340 614 aaPredicted RBP16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 STAU1O95793 577 aaKnown RBP16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 MYL1P05976 194 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 TDGF1P13385 188 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 ANXA13P27216 316 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 ATICP31939 592 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 PDE6CP51160 858 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 PSMC1P62191 440 aaKnown RBP16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 AMPD2Q01433 879 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 FAM160A1Q05DH4 1040 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 TNK2Q07912 1038 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 PSMD2Q13200 908 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 TRPC3Q13507 836 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 TXNDC11Q6PKC3 985 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 GPR161Q8N6U8 529 aaKnown RBP16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 STKLD1Q8NE28 680 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 MYLPFQ96A32 169 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 SYAP1Q96A49 352 aaPredicted RBP16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 EXOC4Q96A65 974 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 SPATA17Q96L03 361 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 FAM83CQ9BQN1 747 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 GKN1Q9NS71 199 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 SERTAD1Q9UHV2 236 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 SMG5Q9UPR3 1016 aaKnown RBP16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 GPR179Q6PRD1 2367 aa16.17■□□□□ 0.18
SDR39U1-205ENST00000553546 PTPRDP23468 1912 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 TRAV19A0A0A6YYK7 116 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 TRIM66O15016 1216 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 HCRTO43612 131 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 ACTN4O43707 911 aaKnown RBP16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 ATP2C2O75185 946 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 TADA3O75528 432 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 USP17L7P0C7H9 530 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 PFKLP17858 780 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 LMO2P25791 158 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 AP3M2P53677 418 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 KRT85P78386 507 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 RUNX3Q13761 415 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 PON2Q15165 354 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 PDGFRLQ15198 375 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 CCDC142Q17RM4 750 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 SPRYD3Q8NCJ5 442 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 TTC8Q8TAM2 541 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 MYCBPAPQ8TBZ2 947 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 TRPC7Q9HCX4 862 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 CRTAC1Q9NQ79 661 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 RBM12Q9NTZ6 932 aaKnown RBP16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 RAB23Q9ULC3 237 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 CCL26Q9Y258 94 aa16.16■□□□□ 0.18
SDR39U1-205ENST00000553546 GREB1Q4ZG55 1949 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 PHACTR2O75167 634 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 CST3P01034 146 aaPredicted RBP16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 CKMP06732 381 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 PDGFRBP09619 1106 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 BDNFP23560 247 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 CMA1P23946 247 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 GNL1P36915 607 aaPredicted RBP16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 GRIK1P39086 918 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 SATB1Q01826 763 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 CYP27A1Q02318 531 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 CCINQ13939 588 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 GAS6Q14393 721 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 KCNB1Q14721 858 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 WDR72Q3MJ13 1102 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 GRAMD1CQ8IYS0 662 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 OR6B3Q8NGW1 331 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 TMEM174Q8WUU8 243 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 PAGE5Q96GU1 130 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 PCED1BQ96HM7 432 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 SPATA32Q96LK8 384 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 ANAPC1Q9H1A4 1944 aa16.15■□□□□ 0.18
SDR39U1-205ENST00000553546 KLRC4O43908 158 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 KIF20AO95235 890 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 PFKFB1P16118 471 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 CNR2P34972 360 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 PPP3CCP48454 512 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 GRSF1Q12849 480 aaKnown RBP eCLIP16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 USP4Q13107 963 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 BIRC3Q13489 604 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 MTF1Q14872 753 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 RSPO4Q2I0M5 234 aaPredicted RBP16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 DENND5BQ6ZUT9 1274 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 SLC9A9Q8IVB4 645 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 CPA6Q8N4T0 437 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 CCDC47Q96A33 483 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 MRPL45Q9BRJ2 306 aaKnown RBP16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 ELOVL4Q9GZR5 314 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 EBF3Q9H4W6 596 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 VRTNQ9H8Y1 702 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 HPS4Q9NQG7 708 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 GMEB2Q9UKD1 530 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 ATP6V1DQ9Y5K8 247 aa16.14■□□□□ 0.17
SDR39U1-205ENST00000553546 A8MXQ7 604 aa16.13■□□□□ 0.17
SDR39U1-205ENST00000553546 PDXKO00764 312 aa16.13■□□□□ 0.17
SDR39U1-205ENST00000553546 TRDMT1O14717 391 aaKnown RBP16.13■□□□□ 0.17
SDR39U1-205ENST00000553546 CLSTN1O94985 981 aa16.13■□□□□ 0.17
SDR39U1-205ENST00000553546 TCF3P15923 654 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms