RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 DDX43Q9NXZ2 648 aaKnown RBP11.91□□□□□ -0.5
CACNB3-224ENST00000552812 IP6K2Q9UHH9 426 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 LRFN2Q9ULH4 789 aa11.91□□□□□ -0.5
CACNB3-224ENST00000552812 TTC3P53804 2025 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 SCN5AQ14524 2016 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 TSC2P49815 1807 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 TMEM191CA6NGB0 347 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 SIGLEC16A6NMB1 481 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 DDX3YO15523 660 aaKnown RBP11.9□□□□□ -0.5
CACNB3-224ENST00000552812 SPOPO43791 374 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 PROSCO94903 275 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 PTPN1P18031 435 aaKnown RBP11.9□□□□□ -0.5
CACNB3-224ENST00000552812 TYMPP19971 482 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 IGFBP6P24592 240 aaPredicted RBP11.9□□□□□ -0.5
CACNB3-224ENST00000552812 CTNNA2P26232 953 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 CYP2C18P33260 490 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 CTNNA1P35221 906 aaKnown RBP11.9□□□□□ -0.5
CACNB3-224ENST00000552812 RNASELQ05823 741 aaKnown RBP11.9□□□□□ -0.5
CACNB3-224ENST00000552812 BST2Q10589 180 aaKnown RBP11.9□□□□□ -0.5
CACNB3-224ENST00000552812 CLUL1Q15846 466 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 LLGL2Q6P1M3 1020 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 CD300LGQ6UXG3 332 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 NECAB2Q7Z6G3 386 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 METTL23Q86XA0 190 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 XYLT1Q86Y38 959 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 NPAS4Q8IUM7 802 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 UBA3Q8TBC4 463 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 ACTRT1Q8TDG2 376 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 FNIP1Q8TF40 1166 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 FAM193BQ96PV7 902 aaPredicted RBP11.9□□□□□ -0.5
CACNB3-224ENST00000552812 MRPL9Q9BYD2 267 aaKnown RBP11.9□□□□□ -0.5
CACNB3-224ENST00000552812 CDH9Q9ULB4 789 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 TET1Q8NFU7 2136 aa11.9□□□□□ -0.5
CACNB3-224ENST00000552812 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-224ENST00000552812 TMEM110-MUSTN1A8MSY1 372 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 PDE2AO00408 941 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-224ENST00000552812 HCRTO43612 131 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 DDHD2O94830 711 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 ERBB2P04626 1255 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 KRT3P12035 628 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 CCDC130P13994 396 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 DNA2P51530 1060 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 SLC8A3P57103 927 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 PSMC1P62191 440 aaKnown RBP11.89□□□□□ -0.51
CACNB3-224ENST00000552812 PIGHQ14442 188 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-224ENST00000552812 LRRC26Q2I0M4 334 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 CYP4A22Q5TCH4 519 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 CNKSR3Q6P9H4 555 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 DCUN1D2Q6PH85 259 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 TMEM110Q86TL2 294 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 ZNF280BQ86YH2 543 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 ZDHHC17Q8IUH5 632 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 RASGEF1CQ8N431 466 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 NIPA2Q8N8Q9 360 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 RABGGTAQ92696 567 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 MCRS1Q96EZ8 462 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 BTBD6Q96KE9 485 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 CASD1Q96PB1 797 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 MCEEQ96PE7 176 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 SYT15Q9BQS2 421 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 TTC7AQ9ULT0 858 aaPredicted RBP11.89□□□□□ -0.51
CACNB3-224ENST00000552812 PCDHA3Q9Y5H8 950 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 MICAL3Q7RTP6 2002 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 TRAPPC3O43617 180 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 BRCC3P46736 316 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 PLA2G4AP47712 749 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 RPL34P49207 117 aaKnown RBP11.89□□□□□ -0.51
CACNB3-224ENST00000552812 RPL7AP62424 266 aaKnown RBP11.89□□□□□ -0.51
CACNB3-224ENST00000552812 PLCB3Q01970 1234 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 PDE4CQ08493 712 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 IKBKEQ14164 716 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 PTPROQ16827 1216 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 TCTN1Q2MV58 587 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 ERCC6LQ2NKX8 1250 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 PMF1Q6P1K2 205 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 PHLDB2Q86SQ0 1253 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 FUKQ8N0W3 1084 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 SLC2A14Q8TDB8 520 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 HSFY1Q96LI6 401 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 ACBD6Q9BR61 282 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 TRIM7Q9C029 511 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 ST7Q9NRC1 585 aa11.89□□□□□ -0.51
CACNB3-224ENST00000552812 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.89□□□□□ -0.51
CACNB3-224ENST00000552812 E5RJQ4 531 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 PGRMC1O00264 195 aaKnown RBP11.88□□□□□ -0.51
CACNB3-224ENST00000552812 XPO1O14980 1071 aaKnown RBP11.88□□□□□ -0.51
CACNB3-224ENST00000552812 KIAA0355O15063 1070 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 PSTPIP1O43586 416 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 CEP104O60308 925 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 B4GALT3O60512 393 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 ADORA2BP29275 332 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 SCNN1AP37088 669 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 ACADSBP45954 432 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 PEX5P50542 639 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 PAN2Q504Q3 1202 aaKnown RBP11.88□□□□□ -0.51
CACNB3-224ENST00000552812 TEX35Q5T0J7 233 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 DCAF12L1Q5VU92 463 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 KIAA0319Q5VV43 1072 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 DEFB128Q7Z7B8 93 aa11.88□□□□□ -0.51
CACNB3-224ENST00000552812 SPATA4Q8NEY3 305 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms