RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 SNCAIPQ9Y6H5 919 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 EIF3HO15372 352 aaKnown RBP eCLIP11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 GNAT1P11488 350 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 TYK2P29597 1187 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 DHX34Q14147 1143 aaKnown RBP11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 TRAIPQ9BWF2 469 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 UBN1Q9NPG3 1134 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 HMGXB4Q9UGU5 601 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 TLK1Q9UKI8 766 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 CICQ96RK0 1608 aaPredicted RBP11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 C17orf102A2RUQ5 167 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 DGKIO75912 1065 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 CD48P09326 243 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 PDCD7Q8N8D1 485 aaKnown RBP11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 FAM81BQ96LP2 452 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 FAM111AQ96PZ2 611 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 TTYH3Q9C0H2 523 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 DUOX1Q9NRD9 1551 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 OR4Q2P0C623 313 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 USP17L7P0C7H9 530 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 PLIN5Q00G26 463 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 ABHD15Q6UXT9 468 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 SPATA2LQ8IUW3 424 aaPredicted RBP11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 SPATA17Q96L03 361 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 PLEKHA5Q9HAU0 1116 aa11.27□□□□□ -0.61
TGFBR1-209ENST00000552516 COL14A1Q05707 1796 aaKnown RBP11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 FAM187AA6NFU0 413 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 GPR25O00155 361 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 TREHO43280 583 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 MIPP30301 263 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 DCAF4L1Q3SXM0 396 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 PRELID2Q8N945 189 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 ZNF512Q96ME7 567 aaPredicted RBP11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 EIF2AQ9BY44 585 aaKnown RBP11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 TPX2Q9ULW0 747 aaKnown RBP11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 ABCC6O95255 1503 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 GIPC1O14908 333 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 MAGEB2O15479 319 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 PECAM1P16284 738 aaPredicted RBP11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 PMLP29590 882 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 WSCD1Q658N2 575 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 LVRNQ6Q4G3 990 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 GPR142Q7Z601 462 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 RCOR2Q8IZ40 523 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 ARMC2Q8NEN0 867 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 PCNTO95613 3336 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 TRDMT1O14717 391 aaKnown RBP11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 PROSCO94903 275 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 SYF2O95926 243 aaKnown RBP11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 BDNFP23560 247 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 ARL13BQ3SXY8 428 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 TTC30AQ86WT1 665 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 ADGRF2Q8IZF7 708 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 B3GALT6Q96L58 329 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 APOBEC3GQ9HC16 384 aaKnown RBP11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 ZFYVE28Q9HCC9 887 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 DDX43Q9NXZ2 648 aaKnown RBP11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 ELF1P32519 619 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 CCDC142Q17RM4 750 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 RMDN1Q96DB5 314 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 CCDC68Q9H2F9 335 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 GTSE1Q9NYZ3 720 aa11.26□□□□□ -0.61
TGFBR1-209ENST00000552516 ZCCHC23Q6ZST2 131 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 PDZD4Q76G19 769 aaPredicted RBP11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 ATP6V1E2Q96A05 226 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 ZFATQ9P243 1243 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 STAP1Q9ULZ2 295 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 A0A087WUV0 522 aaPredicted RBP11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 EEF2KO00418 725 aaKnown RBP11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 CIB2O75838 187 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 HMGCRP04035 888 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 TCN1P20061 433 aaPredicted RBP11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 RFX1P22670 979 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 CCL23P55773 120 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 ZNF844Q08AG5 666 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 WDR93Q6P2C0 686 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 TINF2Q9BSI4 451 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 ACKR2O00590 384 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 EIF3BP55884 814 aaKnown RBP11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 HTRA3P83110 453 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 PTK7Q13308 1070 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 TXNRD3NBQ6F5E7 133 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 RASSF3Q86WH2 238 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 DNERQ8NFT8 737 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 ZNF516Q92618 1163 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 TNIP3Q96KP6 325 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 MROH8Q9H579 483 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 CNTNAP2Q9UHC6 1331 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 SH3BP5O60239 455 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 TAF6P49848 677 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 TKTL1P51854 596 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 MAMLD1Q13495 774 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 TRIM72Q6ZMU5 477 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 THEM5Q8N1Q8 247 aa11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 XPO6Q96QU8 1125 aaKnown RBP11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 DHX15O43143 795 aaKnown RBP11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 PIGHQ14442 188 aaPredicted RBP11.25□□□□□ -0.61
TGFBR1-209ENST00000552516 FASTKD1Q53R41 847 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms