RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 DZANK1Q9NVP4 752 aa13.84□□□□□ -0.19
RAB5C-206ENST00000550406 EYSQ5T1H1 3165 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 CCDC195A0A1B0GUA6 201 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 HHLA1C9JL84 531 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 CCL16O15467 120 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 GYPCP04921 128 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 TRIM21P19474 475 aaKnown RBP13.83□□□□□ -0.2
RAB5C-206ENST00000550406 HOXA9P31269 272 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 STAT1P42224 750 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 TUFMP49411 452 aaKnown RBP13.83□□□□□ -0.2
RAB5C-206ENST00000550406 TBX2Q13207 712 aaPredicted RBP13.83□□□□□ -0.2
RAB5C-206ENST00000550406 SKIV2LQ15477 1246 aaKnown RBP13.83□□□□□ -0.2
RAB5C-206ENST00000550406 CNGA2Q16280 664 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 LCLAT1Q6UWP7 414 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 VSTM1Q6UX27 236 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 TMC5Q6UXY8 1006 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 EP400NLQ6ZTU2 488 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 CLEC20AQ6ZU45 233 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 IRF2BP2Q7Z5L9 587 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 NOP9Q86U38 636 aaKnown RBP13.83□□□□□ -0.2
RAB5C-206ENST00000550406 CMASQ8NFW8 434 aaPredicted RBP13.83□□□□□ -0.2
RAB5C-206ENST00000550406 OLIG1Q8TAK6 271 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 CPLX3Q8WVH0 158 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 DDX1Q92499 740 aaKnown RBP13.83□□□□□ -0.2
RAB5C-206ENST00000550406 C8orf48Q96LL4 319 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 NUP58Q9BVL2 599 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 LRRC3Q9BY71 257 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 PRKD2Q9BZL6 878 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 SFXN1Q9H9B4 322 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 CSNK1G1Q9HCP0 422 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 KRT82Q9NSB4 513 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 ZDHHC7Q9NXF8 308 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 TSPAN16Q9UKR8 245 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 CAPN11Q9UMQ6 739 aa13.83□□□□□ -0.2
RAB5C-206ENST00000550406 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.83□□□□□ -0.2
RAB5C-206ENST00000550406 MYO16Q9Y6X6 1858 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 A0A1W2PQJ5 194 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 LRRC53A6NM62 1247 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 F8VP50 259 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 H3BQ06 376 aaPredicted RBP13.82□□□□□ -0.2
RAB5C-206ENST00000550406 TULP2O00295 520 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 NRG2O14511 850 aaPredicted RBP13.82□□□□□ -0.2
RAB5C-206ENST00000550406 AP1G2O75843 785 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 GABBR2O75899 941 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 MICAL2O94851 1124 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 TPM3P06753 285 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 POU2F2P09086 479 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 HNRNPA1P09651 372 aaKnown RBP eCLIP13.82□□□□□ -0.2
RAB5C-206ENST00000550406 CYP11B1P15538 503 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 HOXB8P17481 243 aaPredicted RBP13.82□□□□□ -0.2
RAB5C-206ENST00000550406 CHRNB2P17787 502 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 GNA15P30679 374 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 GRIK1P39086 918 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 MTMR3Q13615 1198 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 CLUL1Q15846 466 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 GOLGA7BQ2TAP0 167 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 LIN9Q5TKA1 542 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 SPECC1LQ69YQ0 1117 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 DENND1BQ6P3S1 775 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 CACNA2D4Q7Z3S7 1137 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 GPR149Q86SP6 731 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 SCN4BQ8IWT1 228 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 HS6ST3Q8IZP7 471 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 ANKRD52Q8NB46 1076 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 UBA3Q8TBC4 463 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 GIPC2Q8TF65 315 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 SMARCD1Q96GM5 515 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 MRFAP1L1Q96HT8 127 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 SPAG5Q96R06 1193 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 DUSP16Q9BY84 665 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 HCFC1R1Q9NWW0 138 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 DNMT3BQ9UBC3 853 aaKnown RBP13.82□□□□□ -0.2
RAB5C-206ENST00000550406 DPP7Q9UHL4 492 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 MYO6Q9UM54 1294 aa13.82□□□□□ -0.2
RAB5C-206ENST00000550406 GRXCR2A6NFK2 248 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 TNFRSF10BO14763 440 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 THAP12O43422 761 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 FAM200BP0CF97 657 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 HMGA1P17096 107 aaKnown RBP13.81□□□□□ -0.2
RAB5C-206ENST00000550406 KCNA5P22460 613 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 CASP14P31944 242 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 ALDH1A3P47895 512 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 MAP3K7CLP57077 242 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 USP46P62068 366 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 NTHL1P78549 312 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 PTK2Q05397 1052 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 PDE4CQ08493 712 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 GOLGA8FQ08AF8 430 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 GOLGA8DPQ0D2H9 430 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 TMC6Q7Z403 805 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 DNAJB7Q7Z6W7 309 aaPredicted RBP13.81□□□□□ -0.2
RAB5C-206ENST00000550406 WDTC1Q8N5D0 677 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 EPS8L1Q8TE68 723 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 SLC20A1Q8WUM9 679 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 HLA-CQ95604 372 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 SPATA17Q96L03 361 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 DNAI2Q9GZS0 605 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 ADAM7Q9H2U9 754 aa13.81□□□□□ -0.2
RAB5C-206ENST00000550406 ZNF334Q9HCZ1 680 aaPredicted RBP13.81□□□□□ -0.2
RAB5C-206ENST00000550406 AIPL1Q9NZN9 384 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms