RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FAM171BQ6P995 826 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 DPH6Q7L8W6 267 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 RASSF3Q86WH2 238 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 KRI1Q8N9T8 703 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 FSIP1Q8NA03 581 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 KDF1Q8NAX2 398 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 USP33Q8TEY7 942 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 LARP4BQ92615 738 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 TCEAL3Q969E4 200 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 FUBP3Q96I24 572 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 SLC22A12Q96S37 553 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 LINC00597Q9H2U6 94 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 DDX43Q9NXZ2 648 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 SEL1LQ9UBV2 794 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 L1RE1Q9UN81 338 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 AGAP1Q9UPQ3 857 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 PTPRDP23468 1912 aa10.58□□□□□ -0.72
TRAFD1-207ENST00000550051 A0A0A0MRY4 1105 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 LNP1A1A4G5 178 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 H3BQV1 296 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 K7EQS6 105 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 CDX4O14627 284 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 KHNYNO15037 678 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 HDCP19113 662 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 CSRP1P21291 193 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 MAGEA11P43364 429 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 IFNAR2P48551 515 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 DGKEP52429 567 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 TFAMQ00059 246 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 USP4Q13107 963 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 SDHAF4Q5VUM1 108 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 ERICH6BQ5W0A0 696 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 PMS2CLQ68D20 193 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 LIMS2Q7Z4I7 341 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 ADGRG2Q8IZP9 1017 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 TOP6BLQ8N6T0 577 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 ARL14EPQ8N8R7 260 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 C1orf127Q8N9H9 656 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 SH3RF2Q8TEC5 729 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 SPATA17Q96L03 361 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 FAM213AQ9BRX8 229 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 EDEM2Q9BV94 578 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 IKZF4Q9H2S9 585 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 METRNQ9UJH8 293 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 ITGA11Q9UKX5 1188 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 ARHGAP26Q9UNA1 814 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 EXOC7Q9UPT5 735 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 WNT6Q9Y6F9 365 aa10.57□□□□□ -0.72
TRAFD1-207ENST00000550051 PCNX2A6NKB5 2137 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 GIPC1O14908 333 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 NFATC1O95644 943 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 ITGB3P05106 788 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 CKMP06732 381 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 NEFLP07196 543 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 GARTP22102 1010 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 PCSK1P29120 753 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 POLR2BP30876 1174 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 OPRD1P41143 372 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 PDE6CP51160 858 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 NOVA1P51513 510 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 WNT7BP56706 349 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 MRPS21P82921 87 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 RBP5P82980 135 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 GRIN1Q05586 938 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 PSMD2Q13200 908 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 E2F4Q16254 413 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 SOWAHAQ2M3V2 549 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 SH3PXD2AQ5TCZ1 1133 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 VSTM1Q6UX27 236 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 SPATA2LQ8IUW3 424 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 BRSK2Q8IWQ3 736 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 CSGALNACT2Q8N6G5 542 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 STKLD1Q8NE28 680 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 TSTD1Q8NFU3 115 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 OLIG1Q8TAK6 271 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 CNOT6LQ96LI5 555 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 ACCSQ96QU6 501 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 TRPC7Q9HCX4 862 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 TMEM9BQ9NQ34 198 aa10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 HELZP42694 1942 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-207ENST00000550051 C2orf78A6NCI8 922 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 TMEM8BA6NDV4 472 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 C7P10643 843 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 GAP43P17677 238 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 ACAT1P24752 427 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 GJB2P29033 226 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 GBP1P32455 592 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 PPP3CCP48454 512 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 IRX4P78413 519 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 ZXDBP98169 803 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 KCNA1Q09470 495 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 RABEP1Q15276 862 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 CRY1Q16526 586 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 GAB4Q2WGN9 574 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 HSF5Q4G112 596 aaPredicted RBP10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 C2orf27AQ580R0 203 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 SPDYCQ5MJ68 293 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 L1TD1Q5T7N2 865 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 SCARA3Q6AZY7 606 aa10.55□□□□□ -0.72
TRAFD1-207ENST00000550051 UNQ6494/PRO21346Q6UXR6 183 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms