RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 GCNT4Q9P109 453 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 STK17AQ9UEE5 414 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 ARHGAP26Q9UNA1 814 aa21.49■■□□□ 1.03
GATC-202ENST00000548171 LNP1A1A4G5 178 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 KHNYNO15037 678 aaKnown RBP21.48■■□□□ 1.03
GATC-202ENST00000548171 GAP43P17677 238 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 PFKLP17858 780 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 HDCP19113 662 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 GRIN1Q05586 938 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 PMS2CLQ68D20 193 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 BRAPQ7Z569 592 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 KIAA1958Q8N8K9 716 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 ARL14EPQ8N8R7 260 aaPredicted RBP21.48■■□□□ 1.03
GATC-202ENST00000548171 TTC16Q8NEE8 873 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 SH3RF2Q8TEC5 729 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 RBAKQ9NYW8 714 aaPredicted RBP21.48■■□□□ 1.03
GATC-202ENST00000548171 CCDC39Q9UFE4 941 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 SNX9Q9Y5X1 595 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 CACNA1GO43497 2377 aa21.48■■□□□ 1.03
GATC-202ENST00000548171 GABRDO14764 452 aa21.47■■□□□ 1.03
GATC-202ENST00000548171 GARTP22102 1010 aa21.47■■□□□ 1.03
GATC-202ENST00000548171 RBP5P82980 135 aa21.47■■□□□ 1.03
GATC-202ENST00000548171 L1TD1Q5T7N2 865 aaKnown RBP21.47■■□□□ 1.03
GATC-202ENST00000548171 C4orf50Q6ZRC1 276 aa21.47■■□□□ 1.03
GATC-202ENST00000548171 DYMQ7RTS9 669 aa21.47■■□□□ 1.03
GATC-202ENST00000548171 RASSF3Q86WH2 238 aa21.47■■□□□ 1.03
GATC-202ENST00000548171 ADGRF2Q8IZF7 708 aa21.47■■□□□ 1.03
GATC-202ENST00000548171 CSGALNACT2Q8N6G5 542 aa21.47■■□□□ 1.03
GATC-202ENST00000548171 CXorf38Q8TB03 319 aa21.47■■□□□ 1.03
GATC-202ENST00000548171 USP33Q8TEY7 942 aa21.47■■□□□ 1.03
GATC-202ENST00000548171 CNOT6LQ96LI5 555 aaKnown RBP21.47■■□□□ 1.03
GATC-202ENST00000548171 PI4KAP42356 2102 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 C2orf78A6NCI8 922 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 TULP1O00294 542 aaPredicted RBP21.46■■□□□ 1.03
GATC-202ENST00000548171 KRT19P08727 400 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 WNT7BP56706 349 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 FAM171BQ6P995 826 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 VSTM1Q6UX27 236 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 DPH6Q7L8W6 267 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 SCN4BQ8IWT1 228 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 SAAL1Q96ER3 474 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 LINC00597Q9H2U6 94 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 TMEM9BQ9NQ34 198 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 EHD2Q9NZN4 543 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 PCDHB13Q9Y5F0 798 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 PLXND1Q9Y4D7 1925 aa21.46■■□□□ 1.03
GATC-202ENST00000548171 CEACAM1P13688 526 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 CSRP1P21291 193 aaKnown RBP21.45■■□□□ 1.02
GATC-202ENST00000548171 KCNA1Q09470 495 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 MYO1EQ12965 1108 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 ALCAMQ13740 583 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 SF3A1Q15459 793 aaKnown RBP21.45■■□□□ 1.02
GATC-202ENST00000548171 MAPRE1Q15691 268 aaKnown RBP21.45■■□□□ 1.02
GATC-202ENST00000548171 LARP1BQ659C4 914 aaKnown RBP21.45■■□□□ 1.02
GATC-202ENST00000548171 OSTM1Q86WC4 334 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 SPATA17Q96L03 361 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 OLFML3Q9NRN5 406 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 MMP17Q9ULZ9 603 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 SMC3Q9UQE7 1217 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 R3HCC1Q9Y3T6 440 aaKnown RBP21.45■■□□□ 1.02
GATC-202ENST00000548171 LAMA1P25391 3075 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 ZFHX4Q86UP3 3567 aa21.45■■□□□ 1.02
GATC-202ENST00000548171 TNRC6BQ9UPQ9 1833 aaKnown RBP21.45■■□□□ 1.02
GATC-202ENST00000548171 ASCC3Q8N3C0 2202 aaKnown RBP21.44■■□□□ 1.02
GATC-202ENST00000548171 K7EQS6 105 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 OPRD1P41143 372 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 ZNF252P-AS1Q0IIN9 211 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 SOWAHAQ2M3V2 549 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 C2orf27AQ580R0 203 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 SH3PXD2AQ5TCZ1 1133 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 UNQ6494/PRO21346Q6UXR6 183 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 CYP2U1Q7Z449 544 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 SYCP3Q8IZU3 236 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 EPSTI1Q96J88 318 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 TPSD1Q9BZJ3 242 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 TRPM5Q9NZQ8 1165 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 MAGEC2Q9UBF1 373 aaPredicted RBP21.44■■□□□ 1.02
GATC-202ENST00000548171 SIX4Q9UIU6 781 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 CDH9Q9ULB4 789 aa21.44■■□□□ 1.02
GATC-202ENST00000548171 MYOFQ9NZM1 2061 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 GIPC1O14908 333 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 GCNT3O95395 438 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 TMEM191BP0C7N4 346 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 PPP3CCP48454 512 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 MRPS21P82921 87 aaKnown RBP21.43■■□□□ 1.02
GATC-202ENST00000548171 CRY1Q16526 586 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 ANO7Q6IWH7 933 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 SV2BQ7L1I2 683 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 ZSWIM2Q8NEG5 633 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 SYT15Q9BQS2 421 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 MTMR12Q9C0I1 747 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 TBC1D7Q9P0N9 293 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 INVSQ9Y283 1065 aa21.43■■□□□ 1.02
GATC-202ENST00000548171 MYMKA6NI61 221 aa21.42■■□□□ 1.02
GATC-202ENST00000548171 SLC9A3R1O14745 358 aaPredicted RBP21.42■■□□□ 1.02
GATC-202ENST00000548171 KIAA0391O15091 583 aaKnown RBP21.42■■□□□ 1.02
GATC-202ENST00000548171 ALDH1A2O94788 518 aa21.42■■□□□ 1.02
GATC-202ENST00000548171 IGF2RP11717 2491 aa21.42■■□□□ 1.02
GATC-202ENST00000548171 TXLNAP40222 546 aa21.42■■□□□ 1.02
GATC-202ENST00000548171 SEC13P55735 322 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms